Gene : Medtr0625s0020 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11652//PTHR11652:SF17 - 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER Description:  S12-like, 30S ribosomal protein S12 subfamily protein
Genomic Order:  1 Name:  ? Medtr0625s0020
Secondary Identifier:  ? PAC:31115425
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0625s0020 0.5kb upstream 0.5kb upstream 794 true scaffold0625: 8328-9121 Medicago truncatula
Medtr0625s0020 0.5kb upstream 0.5kb upstream 500 false scaffold0625: 8622-9121 Medicago truncatula
Medtr0625s0020 0.5kb downstream 0.5kb downstream 794 true scaffold0625: 7828-8621 Medicago truncatula
Medtr0625s0020 0.5kb downstream 0.5kb downstream 500 false scaffold0625: 7828-8327 Medicago truncatula
Medtr0625s0020 1.0kb upstream 1.0kb upstream 1028 true scaffold0625: 8328-9355 Medicago truncatula
Medtr0625s0020 1.0kb upstream 1.0kb upstream 734 false scaffold0625: 8622-9355 Medicago truncatula
Medtr0625s0020 1.0kb downstream 1.0kb downstream 1294 true scaffold0625: 7328-8621 Medicago truncatula
Medtr0625s0020 1.0kb downstream 1.0kb downstream 1000 false scaffold0625: 7328-8327 Medicago truncatula
Medtr0625s0020 2.0kb upstream 2.0kb upstream 1028 true scaffold0625: 8328-9355 Medicago truncatula
Medtr0625s0020 2.0kb upstream 2.0kb upstream 734 false scaffold0625: 8622-9355 Medicago truncatula
Medtr0625s0020 2.0kb downstream 2.0kb downstream 2294 true scaffold0625: 6328-8621 Medicago truncatula
Medtr0625s0020 2.0kb downstream 2.0kb downstream 2000 false scaffold0625: 6328-8327 Medicago truncatula
Medtr0625s0020 5.0kb upstream 5.0kb upstream 1028 true scaffold0625: 8328-9355 Medicago truncatula
Medtr0625s0020 5.0kb upstream 5.0kb upstream 734 false scaffold0625: 8622-9355 Medicago truncatula
Medtr0625s0020 5.0kb downstream 5.0kb downstream 5294 true scaffold0625: 3328-8621 Medicago truncatula
Medtr0625s0020 5.0kb downstream 5.0kb downstream 5000 false scaffold0625: 3328-8327 Medicago truncatula
Medtr0625s0020 10.0kb upstream 10.0kb upstream 1028 true scaffold0625: 8328-9355 Medicago truncatula
Medtr0625s0020 10.0kb upstream 10.0kb upstream 734 false scaffold0625: 8622-9355 Medicago truncatula
Medtr0625s0020 10.0kb downstream 10.0kb downstream 8621 true scaffold0625: 1-8621 Medicago truncatula
Medtr0625s0020 10.0kb downstream 10.0kb downstream 8327 false scaffold0625: 1-8327 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313695 5265 Fabidae View MSA
124063732 5270 Rosid View MSA
123750891 5271 Pentapetalae View MSA
122796702 5272 Eudicot View MSA
122044358 5273 Angiosperm View MSA
123429171 5275 Viridiplantae View MSA
121351184 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.275        
cufflinks 0.634       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.357        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.269        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain