Gene : Medtr0714s0010 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF08805 - PilS N terminal (PilS) Description:  type II/IV secretion system protein, putative
Genomic Order:  1 Name:  ? Medtr0714s0010
Secondary Identifier:  ? PAC:31092325
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0714s0010 0.5kb upstream 0.5kb upstream 6371 true scaffold0714: 1211-7581 Medicago truncatula
Medtr0714s0010 0.5kb upstream 0.5kb upstream 264 false scaffold0714: 7318-7581 Medicago truncatula
Medtr0714s0010 0.5kb downstream 0.5kb downstream 6607 true scaffold0714: 711-7317 Medicago truncatula
Medtr0714s0010 0.5kb downstream 0.5kb downstream 500 false scaffold0714: 711-1210 Medicago truncatula
Medtr0714s0010 1.0kb upstream 1.0kb upstream 6371 true scaffold0714: 1211-7581 Medicago truncatula
Medtr0714s0010 1.0kb upstream 1.0kb upstream 264 false scaffold0714: 7318-7581 Medicago truncatula
Medtr0714s0010 1.0kb downstream 1.0kb downstream 7107 true scaffold0714: 211-7317 Medicago truncatula
Medtr0714s0010 1.0kb downstream 1.0kb downstream 1000 false scaffold0714: 211-1210 Medicago truncatula
Medtr0714s0010 2.0kb upstream 2.0kb upstream 6371 true scaffold0714: 1211-7581 Medicago truncatula
Medtr0714s0010 2.0kb upstream 2.0kb upstream 264 false scaffold0714: 7318-7581 Medicago truncatula
Medtr0714s0010 2.0kb downstream 2.0kb downstream 7317 true scaffold0714: 1-7317 Medicago truncatula
Medtr0714s0010 2.0kb downstream 2.0kb downstream 1210 false scaffold0714: 1-1210 Medicago truncatula
Medtr0714s0010 5.0kb upstream 5.0kb upstream 6371 true scaffold0714: 1211-7581 Medicago truncatula
Medtr0714s0010 5.0kb upstream 5.0kb upstream 264 false scaffold0714: 7318-7581 Medicago truncatula
Medtr0714s0010 5.0kb downstream 5.0kb downstream 7317 true scaffold0714: 1-7317 Medicago truncatula
Medtr0714s0010 5.0kb downstream 5.0kb downstream 1210 false scaffold0714: 1-1210 Medicago truncatula
Medtr0714s0010 10.0kb upstream 10.0kb upstream 6371 true scaffold0714: 1211-7581 Medicago truncatula
Medtr0714s0010 10.0kb upstream 10.0kb upstream 264 false scaffold0714: 7318-7581 Medicago truncatula
Medtr0714s0010 10.0kb downstream 10.0kb downstream 7317 true scaffold0714: 1-7317 Medicago truncatula
Medtr0714s0010 10.0kb downstream 10.0kb downstream 1210 false scaffold0714: 1-1210 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632176 5273 Angiosperm Singleton cluster - no MSA
122270858 5265 Fabidae Singleton cluster - no MSA
124011533 5270 Rosid Singleton cluster - no MSA
123585432 5271 Pentapetalae Singleton cluster - no MSA
122620129 5272 Eudicot Singleton cluster - no MSA
120904280 5274 Embryophyte Singleton cluster - no MSA
122944935 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain