Gene : Medtr0939s0010 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR31241:SF2 - DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2A-RELATED Description:  dehydration-responsive element-binding protein
Genomic Order:  1 Name:  ? Medtr0939s0010
Secondary Identifier:  ? PAC:31106209
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0939s0010 0.5kb upstream 0.5kb upstream 2452 true scaffold0939: 749-3200 Medicago truncatula
Medtr0939s0010 0.5kb upstream 0.5kb upstream 500 false scaffold0939: 749-1248 Medicago truncatula
Medtr0939s0010 0.5kb downstream 0.5kb downstream 2452 true scaffold0939: 1249-3700 Medicago truncatula
Medtr0939s0010 0.5kb downstream 0.5kb downstream 500 false scaffold0939: 3201-3700 Medicago truncatula
Medtr0939s0010 1.0kb upstream 1.0kb upstream 2952 true scaffold0939: 249-3200 Medicago truncatula
Medtr0939s0010 1.0kb upstream 1.0kb upstream 1000 false scaffold0939: 249-1248 Medicago truncatula
Medtr0939s0010 1.0kb downstream 1.0kb downstream 2802 true scaffold0939: 1249-4050 Medicago truncatula
Medtr0939s0010 1.0kb downstream 1.0kb downstream 850 false scaffold0939: 3201-4050 Medicago truncatula
Medtr0939s0010 2.0kb upstream 2.0kb upstream 3200 true scaffold0939: 1-3200 Medicago truncatula
Medtr0939s0010 2.0kb upstream 2.0kb upstream 1248 false scaffold0939: 1-1248 Medicago truncatula
Medtr0939s0010 2.0kb downstream 2.0kb downstream 2802 true scaffold0939: 1249-4050 Medicago truncatula
Medtr0939s0010 2.0kb downstream 2.0kb downstream 850 false scaffold0939: 3201-4050 Medicago truncatula
Medtr0939s0010 5.0kb upstream 5.0kb upstream 3200 true scaffold0939: 1-3200 Medicago truncatula
Medtr0939s0010 5.0kb upstream 5.0kb upstream 1248 false scaffold0939: 1-1248 Medicago truncatula
Medtr0939s0010 5.0kb downstream 5.0kb downstream 2802 true scaffold0939: 1249-4050 Medicago truncatula
Medtr0939s0010 5.0kb downstream 5.0kb downstream 850 false scaffold0939: 3201-4050 Medicago truncatula
Medtr0939s0010 10.0kb upstream 10.0kb upstream 3200 true scaffold0939: 1-3200 Medicago truncatula
Medtr0939s0010 10.0kb upstream 10.0kb upstream 1248 false scaffold0939: 1-1248 Medicago truncatula
Medtr0939s0010 10.0kb downstream 10.0kb downstream 2802 true scaffold0939: 1249-4050 Medicago truncatula
Medtr0939s0010 10.0kb downstream 10.0kb downstream 850 false scaffold0939: 3201-4050 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310464 5265 Fabidae View MSA
124068554 5270 Rosid View MSA
123752289 5271 Pentapetalae View MSA
122797550 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.975       High
cufflinks 0.872        
cufflinks 0.801        
cufflinks 0.64        
cufflinks 1.031       High
cufflinks 0.471       Low
cufflinks 0.605        
cufflinks 0.645        
cufflinks 0.694        

0 Strain