Gene : Medtr1045s0020 M. truncatula Mt4.0v1
Defline:  (1 of 5) PF05488 - PAAR motif (PAAR_motif) Description:  PAAR motif protein
Genomic Order:  2 Name:  ? Medtr1045s0020
Secondary Identifier:  ? PAC:31069290
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1045s0020 0.5kb upstream 0.5kb upstream 1841 true scaffold1045: 774-2614 Medicago truncatula
Medtr1045s0020 0.5kb upstream 0.5kb upstream 500 false scaffold1045: 774-1273 Medicago truncatula
Medtr1045s0020 0.5kb downstream 0.5kb downstream 1841 true scaffold1045: 1274-3114 Medicago truncatula
Medtr1045s0020 0.5kb downstream 0.5kb downstream 500 false scaffold1045: 2615-3114 Medicago truncatula
Medtr1045s0020 1.0kb upstream 1.0kb upstream 2341 true scaffold1045: 274-2614 Medicago truncatula
Medtr1045s0020 1.0kb upstream 1.0kb upstream 1000 false scaffold1045: 274-1273 Medicago truncatula
Medtr1045s0020 1.0kb downstream 1.0kb downstream 1921 true scaffold1045: 1274-3194 Medicago truncatula
Medtr1045s0020 1.0kb downstream 1.0kb downstream 580 false scaffold1045: 2615-3194 Medicago truncatula
Medtr1045s0020 2.0kb upstream 2.0kb upstream 2614 true scaffold1045: 1-2614 Medicago truncatula
Medtr1045s0020 2.0kb upstream 2.0kb upstream 1273 false scaffold1045: 1-1273 Medicago truncatula
Medtr1045s0020 2.0kb downstream 2.0kb downstream 1921 true scaffold1045: 1274-3194 Medicago truncatula
Medtr1045s0020 2.0kb downstream 2.0kb downstream 580 false scaffold1045: 2615-3194 Medicago truncatula
Medtr1045s0020 5.0kb upstream 5.0kb upstream 2614 true scaffold1045: 1-2614 Medicago truncatula
Medtr1045s0020 5.0kb upstream 5.0kb upstream 1273 false scaffold1045: 1-1273 Medicago truncatula
Medtr1045s0020 5.0kb downstream 5.0kb downstream 1921 true scaffold1045: 1274-3194 Medicago truncatula
Medtr1045s0020 5.0kb downstream 5.0kb downstream 580 false scaffold1045: 2615-3194 Medicago truncatula
Medtr1045s0020 10.0kb upstream 10.0kb upstream 2614 true scaffold1045: 1-2614 Medicago truncatula
Medtr1045s0020 10.0kb upstream 10.0kb upstream 1273 false scaffold1045: 1-1273 Medicago truncatula
Medtr1045s0020 10.0kb downstream 10.0kb downstream 1921 true scaffold1045: 1274-3194 Medicago truncatula
Medtr1045s0020 10.0kb downstream 10.0kb downstream 580 false scaffold1045: 2615-3194 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632289 5273 Angiosperm Singleton cluster - no MSA
122270977 5265 Fabidae Singleton cluster - no MSA
124011646 5270 Rosid Singleton cluster - no MSA
123585545 5271 Pentapetalae Singleton cluster - no MSA
122620242 5272 Eudicot Singleton cluster - no MSA
120904393 5274 Embryophyte Singleton cluster - no MSA
122945046 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain