Gene : Medtr0167s0040 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  1
Name:  ? Medtr0167s0040 Secondary Identifier:  ? PAC:31084814
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0167s0040 0.5kb upstream 0.5kb upstream 10035 true scaffold0167: 16232-26266 Medicago truncatula
Medtr0167s0040 0.5kb upstream 0.5kb upstream 500 false scaffold0167: 16232-16731 Medicago truncatula
Medtr0167s0040 0.5kb downstream 0.5kb downstream 10035 true scaffold0167: 16732-26766 Medicago truncatula
Medtr0167s0040 0.5kb downstream 0.5kb downstream 500 false scaffold0167: 26267-26766 Medicago truncatula
Medtr0167s0040 1.0kb upstream 1.0kb upstream 10535 true scaffold0167: 15732-26266 Medicago truncatula
Medtr0167s0040 1.0kb upstream 1.0kb upstream 1000 false scaffold0167: 15732-16731 Medicago truncatula
Medtr0167s0040 1.0kb downstream 1.0kb downstream 10535 true scaffold0167: 16732-27266 Medicago truncatula
Medtr0167s0040 1.0kb downstream 1.0kb downstream 1000 false scaffold0167: 26267-27266 Medicago truncatula
Medtr0167s0040 2.0kb upstream 2.0kb upstream 11535 true scaffold0167: 14732-26266 Medicago truncatula
Medtr0167s0040 2.0kb upstream 2.0kb upstream 2000 false scaffold0167: 14732-16731 Medicago truncatula
Medtr0167s0040 2.0kb downstream 2.0kb downstream 11535 true scaffold0167: 16732-28266 Medicago truncatula
Medtr0167s0040 2.0kb downstream 2.0kb downstream 2000 false scaffold0167: 26267-28266 Medicago truncatula
Medtr0167s0040 5.0kb upstream 5.0kb upstream 14535 true scaffold0167: 11732-26266 Medicago truncatula
Medtr0167s0040 5.0kb upstream 5.0kb upstream 5000 false scaffold0167: 11732-16731 Medicago truncatula
Medtr0167s0040 5.0kb downstream 5.0kb downstream 14535 true scaffold0167: 16732-31266 Medicago truncatula
Medtr0167s0040 5.0kb downstream 5.0kb downstream 5000 false scaffold0167: 26267-31266 Medicago truncatula
Medtr0167s0040 10.0kb upstream 10.0kb upstream 19535 true scaffold0167: 6732-26266 Medicago truncatula
Medtr0167s0040 10.0kb upstream 10.0kb upstream 10000 false scaffold0167: 6732-16731 Medicago truncatula
Medtr0167s0040 10.0kb downstream 10.0kb downstream 19535 true scaffold0167: 16732-36266 Medicago truncatula
Medtr0167s0040 10.0kb downstream 10.0kb downstream 10000 false scaffold0167: 26267-36266 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026396 5273 Angiosperm View MSA
122307251 5265 Fabidae View MSA
124065900 5270 Rosid View MSA
123738543 5271 Pentapetalae View MSA
122790155 5272 Eudicot View MSA
121296309 5274 Embryophyte View MSA
123334495 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.83        
cufflinks 1.21        
cufflinks 1.353        
cufflinks 0.353       Low
cufflinks 1.304        
cufflinks 0.822        
cufflinks 0.757        
cufflinks 1.012        
cufflinks 0.286       Low

0 Strain