Gene : Medtr0219s0070 M. truncatula Mt4.0v1
Defline:  (1 of 1) 1.6.5.4//4.2.1.1 - Carbonate dehydratase / Carbonic dehydratase Description:  eukaryotic-type carbonic anhydrase
Genomic Order:  5 Name:  ? Medtr0219s0070
Secondary Identifier:  ? PAC:31084878
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CYANCAT-PWY Medicago truncatula pathologic  
Mtruncatula PWY-241 Medicago truncatula pathologic  
Mtruncatula PWY-7115 Medicago truncatula pathologic  
Mtruncatula PWY-7117 Medicago truncatula pathologic  
Mtruncatula PWYQT-4429 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0219s0070 0.5kb upstream 0.5kb upstream 3370 true scaffold0219: 11509-14878 Medicago truncatula
Medtr0219s0070 0.5kb upstream 0.5kb upstream 500 false scaffold0219: 14379-14878 Medicago truncatula
Medtr0219s0070 0.5kb downstream 0.5kb downstream 3370 true scaffold0219: 11009-14378 Medicago truncatula
Medtr0219s0070 0.5kb downstream 0.5kb downstream 500 false scaffold0219: 11009-11508 Medicago truncatula
Medtr0219s0070 1.0kb upstream 1.0kb upstream 3870 true scaffold0219: 11509-15378 Medicago truncatula
Medtr0219s0070 1.0kb upstream 1.0kb upstream 1000 false scaffold0219: 14379-15378 Medicago truncatula
Medtr0219s0070 1.0kb downstream 1.0kb downstream 3870 true scaffold0219: 10509-14378 Medicago truncatula
Medtr0219s0070 1.0kb downstream 1.0kb downstream 1000 false scaffold0219: 10509-11508 Medicago truncatula
Medtr0219s0070 2.0kb upstream 2.0kb upstream 4870 true scaffold0219: 11509-16378 Medicago truncatula
Medtr0219s0070 2.0kb upstream 2.0kb upstream 2000 false scaffold0219: 14379-16378 Medicago truncatula
Medtr0219s0070 2.0kb downstream 2.0kb downstream 4870 true scaffold0219: 9509-14378 Medicago truncatula
Medtr0219s0070 2.0kb downstream 2.0kb downstream 2000 false scaffold0219: 9509-11508 Medicago truncatula
Medtr0219s0070 5.0kb upstream 5.0kb upstream 7870 true scaffold0219: 11509-19378 Medicago truncatula
Medtr0219s0070 5.0kb upstream 5.0kb upstream 5000 false scaffold0219: 14379-19378 Medicago truncatula
Medtr0219s0070 5.0kb downstream 5.0kb downstream 7870 true scaffold0219: 6509-14378 Medicago truncatula
Medtr0219s0070 5.0kb downstream 5.0kb downstream 5000 false scaffold0219: 6509-11508 Medicago truncatula
Medtr0219s0070 10.0kb upstream 10.0kb upstream 12870 true scaffold0219: 11509-24378 Medicago truncatula
Medtr0219s0070 10.0kb upstream 10.0kb upstream 10000 false scaffold0219: 14379-24378 Medicago truncatula
Medtr0219s0070 10.0kb downstream 10.0kb downstream 12870 true scaffold0219: 1509-14378 Medicago truncatula
Medtr0219s0070 10.0kb downstream 10.0kb downstream 10000 false scaffold0219: 1509-11508 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310982 5265 Fabidae View MSA
124071031 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.015     Low  
cufflinks 0.057     Low  
cufflinks 0.243        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.16        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.215        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain