Gene : Medtr0287s0050 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG3801 - Uncharacterized conserved protein BCN92 Description:  complex 1 protein, LYR family protein
Genomic Order:  2 Name:  ? Medtr0287s0050
Secondary Identifier:  ? PAC:31100993
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0287s0050 0.5kb upstream 0.5kb upstream 782 true scaffold0287: 10291-11072 Medicago truncatula
Medtr0287s0050 0.5kb upstream 0.5kb upstream 500 false scaffold0287: 10573-11072 Medicago truncatula
Medtr0287s0050 0.5kb downstream 0.5kb downstream 782 true scaffold0287: 9791-10572 Medicago truncatula
Medtr0287s0050 0.5kb downstream 0.5kb downstream 500 false scaffold0287: 9791-10290 Medicago truncatula
Medtr0287s0050 1.0kb upstream 1.0kb upstream 1282 true scaffold0287: 10291-11572 Medicago truncatula
Medtr0287s0050 1.0kb upstream 1.0kb upstream 1000 false scaffold0287: 10573-11572 Medicago truncatula
Medtr0287s0050 1.0kb downstream 1.0kb downstream 1282 true scaffold0287: 9291-10572 Medicago truncatula
Medtr0287s0050 1.0kb downstream 1.0kb downstream 1000 false scaffold0287: 9291-10290 Medicago truncatula
Medtr0287s0050 2.0kb upstream 2.0kb upstream 2282 true scaffold0287: 10291-12572 Medicago truncatula
Medtr0287s0050 2.0kb upstream 2.0kb upstream 2000 false scaffold0287: 10573-12572 Medicago truncatula
Medtr0287s0050 2.0kb downstream 2.0kb downstream 2282 true scaffold0287: 8291-10572 Medicago truncatula
Medtr0287s0050 2.0kb downstream 2.0kb downstream 2000 false scaffold0287: 8291-10290 Medicago truncatula
Medtr0287s0050 5.0kb upstream 5.0kb upstream 5282 true scaffold0287: 10291-15572 Medicago truncatula
Medtr0287s0050 5.0kb upstream 5.0kb upstream 5000 false scaffold0287: 10573-15572 Medicago truncatula
Medtr0287s0050 5.0kb downstream 5.0kb downstream 5282 true scaffold0287: 5291-10572 Medicago truncatula
Medtr0287s0050 5.0kb downstream 5.0kb downstream 5000 false scaffold0287: 5291-10290 Medicago truncatula
Medtr0287s0050 10.0kb upstream 10.0kb upstream 10282 true scaffold0287: 10291-20572 Medicago truncatula
Medtr0287s0050 10.0kb upstream 10.0kb upstream 10000 false scaffold0287: 10573-20572 Medicago truncatula
Medtr0287s0050 10.0kb downstream 10.0kb downstream 10282 true scaffold0287: 291-10572 Medicago truncatula
Medtr0287s0050 10.0kb downstream 10.0kb downstream 10000 false scaffold0287: 291-10290 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303364 5265 Fabidae View MSA
124061407 5270 Rosid View MSA
123753120 5271 Pentapetalae View MSA
122790951 5272 Eudicot View MSA
122044575 5273 Angiosperm View MSA
121346889 5274 Embryophyte View MSA
123426954 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.083        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.213        

0 Strain