Gene : Medtr0332s0020 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF13462 - Thioredoxin (Thioredoxin_4) Description:  thioredoxin protein
Genomic Order:  2 Name:  ? Medtr0332s0020
Secondary Identifier:  ? PAC:31092080
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0332s0020 0.5kb upstream 0.5kb upstream 3139 true scaffold0332: 4555-7693 Medicago truncatula
Medtr0332s0020 0.5kb upstream 0.5kb upstream 500 false scaffold0332: 4555-5054 Medicago truncatula
Medtr0332s0020 0.5kb downstream 0.5kb downstream 3139 true scaffold0332: 5055-8193 Medicago truncatula
Medtr0332s0020 0.5kb downstream 0.5kb downstream 500 false scaffold0332: 7694-8193 Medicago truncatula
Medtr0332s0020 1.0kb upstream 1.0kb upstream 3639 true scaffold0332: 4055-7693 Medicago truncatula
Medtr0332s0020 1.0kb upstream 1.0kb upstream 1000 false scaffold0332: 4055-5054 Medicago truncatula
Medtr0332s0020 1.0kb downstream 1.0kb downstream 3639 true scaffold0332: 5055-8693 Medicago truncatula
Medtr0332s0020 1.0kb downstream 1.0kb downstream 1000 false scaffold0332: 7694-8693 Medicago truncatula
Medtr0332s0020 2.0kb upstream 2.0kb upstream 4639 true scaffold0332: 3055-7693 Medicago truncatula
Medtr0332s0020 2.0kb upstream 2.0kb upstream 2000 false scaffold0332: 3055-5054 Medicago truncatula
Medtr0332s0020 2.0kb downstream 2.0kb downstream 4639 true scaffold0332: 5055-9693 Medicago truncatula
Medtr0332s0020 2.0kb downstream 2.0kb downstream 2000 false scaffold0332: 7694-9693 Medicago truncatula
Medtr0332s0020 5.0kb upstream 5.0kb upstream 7639 true scaffold0332: 55-7693 Medicago truncatula
Medtr0332s0020 5.0kb upstream 5.0kb upstream 5000 false scaffold0332: 55-5054 Medicago truncatula
Medtr0332s0020 5.0kb downstream 5.0kb downstream 7639 true scaffold0332: 5055-12693 Medicago truncatula
Medtr0332s0020 5.0kb downstream 5.0kb downstream 5000 false scaffold0332: 7694-12693 Medicago truncatula
Medtr0332s0020 10.0kb upstream 10.0kb upstream 7693 true scaffold0332: 1-7693 Medicago truncatula
Medtr0332s0020 10.0kb upstream 10.0kb upstream 5054 false scaffold0332: 1-5054 Medicago truncatula
Medtr0332s0020 10.0kb downstream 10.0kb downstream 12639 true scaffold0332: 5055-17693 Medicago truncatula
Medtr0332s0020 10.0kb downstream 10.0kb downstream 10000 false scaffold0332: 7694-17693 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309963 5265 Fabidae View MSA
124061875 5270 Rosid View MSA
123753455 5271 Pentapetalae View MSA
122790838 5272 Eudicot View MSA
122047408 5273 Angiosperm View MSA
121345185 5274 Embryophyte View MSA
123425798 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.426     High  
cufflinks 19.046     High  
cufflinks 14.069     High  
cufflinks 22.324     High High
cufflinks 14.988     High  
cufflinks 7.746       Low
cufflinks 16.203     High  
cufflinks 15.055     High  
cufflinks 13.248     High  

0 Strain