Gene : SapurV1A.0404s0220 S. purpurea v1.0
Defline:  (1 of 1) PTHR11777//PTHR11777:SF18 - ALANYL-TRNA SYNTHETASE // ALANINE--TRNA LIGASE, CYTOPLASMIC Genomic Order:  682
Name:  ? SapurV1A.0404s0220 Secondary Identifier:  ? PAC:31428835
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea TRNA-CHARGING-PWY Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0404s0220 0.5kb upstream 0.5kb upstream 8514 true chr05: 6298291-6306804 Salix purpurea
SapurV1A.0404s0220 0.5kb upstream 0.5kb upstream 500 false chr05: 6306305-6306804 Salix purpurea
SapurV1A.0404s0220 0.5kb downstream 0.5kb downstream 8514 true chr05: 6297791-6306304 Salix purpurea
SapurV1A.0404s0220 0.5kb downstream 0.5kb downstream 500 false chr05: 6297791-6298290 Salix purpurea
SapurV1A.0404s0220 1.0kb upstream 1.0kb upstream 9014 true chr05: 6298291-6307304 Salix purpurea
SapurV1A.0404s0220 1.0kb upstream 1.0kb upstream 1000 false chr05: 6306305-6307304 Salix purpurea
SapurV1A.0404s0220 1.0kb downstream 1.0kb downstream 9014 true chr05: 6297291-6306304 Salix purpurea
SapurV1A.0404s0220 1.0kb downstream 1.0kb downstream 1000 false chr05: 6297291-6298290 Salix purpurea
SapurV1A.0404s0220 2.0kb upstream 2.0kb upstream 10014 true chr05: 6298291-6308304 Salix purpurea
SapurV1A.0404s0220 2.0kb upstream 2.0kb upstream 2000 false chr05: 6306305-6308304 Salix purpurea
SapurV1A.0404s0220 2.0kb downstream 2.0kb downstream 10014 true chr05: 6296291-6306304 Salix purpurea
SapurV1A.0404s0220 2.0kb downstream 2.0kb downstream 2000 false chr05: 6296291-6298290 Salix purpurea
SapurV1A.0404s0220 5.0kb upstream 5.0kb upstream 13014 true chr05: 6298291-6311304 Salix purpurea
SapurV1A.0404s0220 5.0kb upstream 5.0kb upstream 5000 false chr05: 6306305-6311304 Salix purpurea
SapurV1A.0404s0220 5.0kb downstream 5.0kb downstream 13014 true chr05: 6293291-6306304 Salix purpurea
SapurV1A.0404s0220 5.0kb downstream 5.0kb downstream 5000 false chr05: 6293291-6298290 Salix purpurea
SapurV1A.0404s0220 10.0kb upstream 10.0kb upstream 18014 true chr05: 6298291-6316304 Salix purpurea
SapurV1A.0404s0220 10.0kb upstream 10.0kb upstream 10000 false chr05: 6306305-6316304 Salix purpurea
SapurV1A.0404s0220 10.0kb downstream 10.0kb downstream 18014 true chr05: 6288291-6306304 Salix purpurea
SapurV1A.0404s0220 10.0kb downstream 10.0kb downstream 10000 false chr05: 6288291-6298290 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452059 5262 Malpighiales View MSA
124240298 5268 Malvidae View MSA
124063784 5270 Rosid View MSA
123740226 5271 Pentapetalae View MSA
122791486 5272 Eudicot View MSA
122047019 5273 Angiosperm View MSA
121346985 5274 Embryophyte View MSA
123424131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain