Gene : SapurV1A.0475s0030 S. purpurea v1.0
Defline:  (1 of 1) PTHR12001//PTHR12001:SF57 - GERANYLGERANYL PYROPHOSPHATE SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  424
Name:  ? SapurV1A.0475s0030 Secondary Identifier:  ? PAC:31430520
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-5122 Salix purpurea pathologic  
Spurpurea PWY-5123 Salix purpurea pathologic  
Spurpurea PWY-5910 Salix purpurea pathologic  
Spurpurea PWY-7709 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0475s0030 0.5kb upstream 0.5kb upstream 1763 true chr15: 12003440-12005202 Salix purpurea
SapurV1A.0475s0030 0.5kb upstream 0.5kb upstream 500 false chr15: 12003440-12003939 Salix purpurea
SapurV1A.0475s0030 0.5kb downstream 0.5kb downstream 1763 true chr15: 12003940-12005702 Salix purpurea
SapurV1A.0475s0030 0.5kb downstream 0.5kb downstream 500 false chr15: 12005203-12005702 Salix purpurea
SapurV1A.0475s0030 1.0kb upstream 1.0kb upstream 2263 true chr15: 12002940-12005202 Salix purpurea
SapurV1A.0475s0030 1.0kb upstream 1.0kb upstream 1000 false chr15: 12002940-12003939 Salix purpurea
SapurV1A.0475s0030 1.0kb downstream 1.0kb downstream 2263 true chr15: 12003940-12006202 Salix purpurea
SapurV1A.0475s0030 1.0kb downstream 1.0kb downstream 1000 false chr15: 12005203-12006202 Salix purpurea
SapurV1A.0475s0030 2.0kb upstream 2.0kb upstream 3263 true chr15: 12001940-12005202 Salix purpurea
SapurV1A.0475s0030 2.0kb upstream 2.0kb upstream 2000 false chr15: 12001940-12003939 Salix purpurea
SapurV1A.0475s0030 2.0kb downstream 2.0kb downstream 3263 true chr15: 12003940-12007202 Salix purpurea
SapurV1A.0475s0030 2.0kb downstream 2.0kb downstream 2000 false chr15: 12005203-12007202 Salix purpurea
SapurV1A.0475s0030 5.0kb upstream 5.0kb upstream 6263 true chr15: 11998940-12005202 Salix purpurea
SapurV1A.0475s0030 5.0kb upstream 5.0kb upstream 5000 false chr15: 11998940-12003939 Salix purpurea
SapurV1A.0475s0030 5.0kb downstream 5.0kb downstream 6263 true chr15: 12003940-12010202 Salix purpurea
SapurV1A.0475s0030 5.0kb downstream 5.0kb downstream 5000 false chr15: 12005203-12010202 Salix purpurea
SapurV1A.0475s0030 10.0kb upstream 10.0kb upstream 11263 true chr15: 11993940-12005202 Salix purpurea
SapurV1A.0475s0030 10.0kb upstream 10.0kb upstream 10000 false chr15: 11993940-12003939 Salix purpurea
SapurV1A.0475s0030 10.0kb downstream 10.0kb downstream 11263 true chr15: 12003940-12015202 Salix purpurea
SapurV1A.0475s0030 10.0kb downstream 10.0kb downstream 10000 false chr15: 12005203-12015202 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792206 5273 Angiosperm View MSA
122462655 5262 Malpighiales View MSA
124254265 5268 Malvidae View MSA
124070417 5270 Rosid View MSA
123742390 5271 Pentapetalae View MSA
122796955 5272 Eudicot View MSA
121063452 5274 Embryophyte View MSA
123103200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain