Gene : SapurV1A.1012s0050 S. purpurea v1.0
Defline:  (1 of 1) PTHR11451//PTHR11451:SF6 - TRNA SYNTHETASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1110
Name:  ? SapurV1A.1012s0050 Secondary Identifier:  ? PAC:31447564
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea TRNA-CHARGING-PWY Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1012s0050 0.5kb upstream 0.5kb upstream 7837 true chr17: 17678013-17685849 Salix purpurea
SapurV1A.1012s0050 0.5kb upstream 0.5kb upstream 500 false chr17: 17678013-17678512 Salix purpurea
SapurV1A.1012s0050 0.5kb downstream 0.5kb downstream 7837 true chr17: 17678513-17686349 Salix purpurea
SapurV1A.1012s0050 0.5kb downstream 0.5kb downstream 500 false chr17: 17685850-17686349 Salix purpurea
SapurV1A.1012s0050 1.0kb upstream 1.0kb upstream 8337 true chr17: 17677513-17685849 Salix purpurea
SapurV1A.1012s0050 1.0kb upstream 1.0kb upstream 1000 false chr17: 17677513-17678512 Salix purpurea
SapurV1A.1012s0050 1.0kb downstream 1.0kb downstream 8337 true chr17: 17678513-17686849 Salix purpurea
SapurV1A.1012s0050 1.0kb downstream 1.0kb downstream 1000 false chr17: 17685850-17686849 Salix purpurea
SapurV1A.1012s0050 2.0kb upstream 2.0kb upstream 9337 true chr17: 17676513-17685849 Salix purpurea
SapurV1A.1012s0050 2.0kb upstream 2.0kb upstream 2000 false chr17: 17676513-17678512 Salix purpurea
SapurV1A.1012s0050 2.0kb downstream 2.0kb downstream 9337 true chr17: 17678513-17687849 Salix purpurea
SapurV1A.1012s0050 2.0kb downstream 2.0kb downstream 2000 false chr17: 17685850-17687849 Salix purpurea
SapurV1A.1012s0050 5.0kb upstream 5.0kb upstream 12337 true chr17: 17673513-17685849 Salix purpurea
SapurV1A.1012s0050 5.0kb upstream 5.0kb upstream 5000 false chr17: 17673513-17678512 Salix purpurea
SapurV1A.1012s0050 5.0kb downstream 5.0kb downstream 12337 true chr17: 17678513-17690849 Salix purpurea
SapurV1A.1012s0050 5.0kb downstream 5.0kb downstream 5000 false chr17: 17685850-17690849 Salix purpurea
SapurV1A.1012s0050 10.0kb upstream 10.0kb upstream 17337 true chr17: 17668513-17685849 Salix purpurea
SapurV1A.1012s0050 10.0kb upstream 10.0kb upstream 10000 false chr17: 17668513-17678512 Salix purpurea
SapurV1A.1012s0050 10.0kb downstream 10.0kb downstream 17337 true chr17: 17678513-17695849 Salix purpurea
SapurV1A.1012s0050 10.0kb downstream 10.0kb downstream 10000 false chr17: 17685850-17695849 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453540 5262 Malpighiales View MSA
124238482 5268 Malvidae View MSA
124067863 5270 Rosid View MSA
123737640 5271 Pentapetalae View MSA
122793581 5272 Eudicot View MSA
122044069 5273 Angiosperm View MSA
121345199 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain