Gene : SapurV1A.1089s0030 S. purpurea v1.0
Defline:  (1 of 1) PTHR12526:SF337 - STARCH SYNTHASE 2, CHLOROPLASTIC/AMYLOPLASTIC Genomic Order:  575
Name:  ? SapurV1A.1089s0030 Secondary Identifier:  ? PAC:31448777
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea GLYCOGENSYNTH-PWY Salix purpurea pathologic  
Spurpurea PWY-622 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1089s0030 0.5kb upstream 0.5kb upstream 6506 true chr17: 11925947-11932452 Salix purpurea
SapurV1A.1089s0030 0.5kb upstream 0.5kb upstream 500 false chr17: 11931953-11932452 Salix purpurea
SapurV1A.1089s0030 0.5kb downstream 0.5kb downstream 6506 true chr17: 11925447-11931952 Salix purpurea
SapurV1A.1089s0030 0.5kb downstream 0.5kb downstream 500 false chr17: 11925447-11925946 Salix purpurea
SapurV1A.1089s0030 1.0kb upstream 1.0kb upstream 7006 true chr17: 11925947-11932952 Salix purpurea
SapurV1A.1089s0030 1.0kb upstream 1.0kb upstream 1000 false chr17: 11931953-11932952 Salix purpurea
SapurV1A.1089s0030 1.0kb downstream 1.0kb downstream 7006 true chr17: 11924947-11931952 Salix purpurea
SapurV1A.1089s0030 1.0kb downstream 1.0kb downstream 1000 false chr17: 11924947-11925946 Salix purpurea
SapurV1A.1089s0030 2.0kb upstream 2.0kb upstream 8006 true chr17: 11925947-11933952 Salix purpurea
SapurV1A.1089s0030 2.0kb upstream 2.0kb upstream 2000 false chr17: 11931953-11933952 Salix purpurea
SapurV1A.1089s0030 2.0kb downstream 2.0kb downstream 8006 true chr17: 11923947-11931952 Salix purpurea
SapurV1A.1089s0030 2.0kb downstream 2.0kb downstream 2000 false chr17: 11923947-11925946 Salix purpurea
SapurV1A.1089s0030 5.0kb upstream 5.0kb upstream 11006 true chr17: 11925947-11936952 Salix purpurea
SapurV1A.1089s0030 5.0kb upstream 5.0kb upstream 5000 false chr17: 11931953-11936952 Salix purpurea
SapurV1A.1089s0030 5.0kb downstream 5.0kb downstream 11006 true chr17: 11920947-11931952 Salix purpurea
SapurV1A.1089s0030 5.0kb downstream 5.0kb downstream 5000 false chr17: 11920947-11925946 Salix purpurea
SapurV1A.1089s0030 10.0kb upstream 10.0kb upstream 16006 true chr17: 11925947-11941952 Salix purpurea
SapurV1A.1089s0030 10.0kb upstream 10.0kb upstream 10000 false chr17: 11931953-11941952 Salix purpurea
SapurV1A.1089s0030 10.0kb downstream 10.0kb downstream 16006 true chr17: 11915947-11931952 Salix purpurea
SapurV1A.1089s0030 10.0kb downstream 10.0kb downstream 10000 false chr17: 11915947-11925946 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454908 5262 Malpighiales View MSA
124239099 5268 Malvidae View MSA
124066587 5270 Rosid View MSA
123744003 5271 Pentapetalae View MSA
122787814 5272 Eudicot View MSA
122042262 5273 Angiosperm View MSA
121347324 5274 Embryophyte View MSA
123426751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain