Gene : SapurV1A.0399s0230 S. purpurea v1.0

Defline:  (1 of 2) K13156 - U11/U12 small nuclear ribonucleoprotein 48 kDa protein (SNRNP48) Genomic Order:  264
Name:  ? SapurV1A.0399s0230 Secondary Identifier:  ? PAC:31423701

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0399s0230 0.5kb upstream 0.5kb upstream 4903 true chr19: 5872479-5877381 Salix purpurea
SapurV1A.0399s0230 0.5kb upstream 0.5kb upstream 500 false chr19: 5872479-5872978 Salix purpurea
SapurV1A.0399s0230 0.5kb downstream 0.5kb downstream 4903 true chr19: 5872979-5877881 Salix purpurea
SapurV1A.0399s0230 0.5kb downstream 0.5kb downstream 500 false chr19: 5877382-5877881 Salix purpurea
SapurV1A.0399s0230 1.0kb upstream 1.0kb upstream 5403 true chr19: 5871979-5877381 Salix purpurea
SapurV1A.0399s0230 1.0kb upstream 1.0kb upstream 1000 false chr19: 5871979-5872978 Salix purpurea
SapurV1A.0399s0230 1.0kb downstream 1.0kb downstream 5403 true chr19: 5872979-5878381 Salix purpurea
SapurV1A.0399s0230 1.0kb downstream 1.0kb downstream 1000 false chr19: 5877382-5878381 Salix purpurea
SapurV1A.0399s0230 2.0kb upstream 2.0kb upstream 6403 true chr19: 5870979-5877381 Salix purpurea
SapurV1A.0399s0230 2.0kb upstream 2.0kb upstream 2000 false chr19: 5870979-5872978 Salix purpurea
SapurV1A.0399s0230 2.0kb downstream 2.0kb downstream 6403 true chr19: 5872979-5879381 Salix purpurea
SapurV1A.0399s0230 2.0kb downstream 2.0kb downstream 2000 false chr19: 5877382-5879381 Salix purpurea
SapurV1A.0399s0230 5.0kb upstream 5.0kb upstream 9403 true chr19: 5867979-5877381 Salix purpurea
SapurV1A.0399s0230 5.0kb upstream 5.0kb upstream 5000 false chr19: 5867979-5872978 Salix purpurea
SapurV1A.0399s0230 5.0kb downstream 5.0kb downstream 9403 true chr19: 5872979-5882381 Salix purpurea
SapurV1A.0399s0230 5.0kb downstream 5.0kb downstream 5000 false chr19: 5877382-5882381 Salix purpurea
SapurV1A.0399s0230 10.0kb upstream 10.0kb upstream 14403 true chr19: 5862979-5877381 Salix purpurea
SapurV1A.0399s0230 10.0kb upstream 10.0kb upstream 10000 false chr19: 5862979-5872978 Salix purpurea
SapurV1A.0399s0230 10.0kb downstream 10.0kb downstream 14403 true chr19: 5872979-5887381 Salix purpurea
SapurV1A.0399s0230 10.0kb downstream 10.0kb downstream 10000 false chr19: 5877382-5887381 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458543 5262 Malpighiales View MSA
124239890 5268 Malvidae View MSA
124063423 5270 Rosid View MSA
123740826 5271 Pentapetalae View MSA
122788385 5272 Eudicot View MSA
122044714 5273 Angiosperm View MSA
121344837 5274 Embryophyte View MSA
123380110 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain