Gene : SapurV1A.0448s0110 S. purpurea v1.0

Defline:  (1 of 4) PTHR15141//PTHR15141:SF52 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Genomic Order:  11
Name:  ? SapurV1A.0448s0110 Secondary Identifier:  ? PAC:31402260

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0448s0110 0.5kb upstream 0.5kb upstream 7682 true Scaffold0448: 204815-212496 Salix purpurea
SapurV1A.0448s0110 0.5kb upstream 0.5kb upstream 500 false Scaffold0448: 204815-205314 Salix purpurea
SapurV1A.0448s0110 0.5kb downstream 0.5kb downstream 7682 true Scaffold0448: 205315-212996 Salix purpurea
SapurV1A.0448s0110 0.5kb downstream 0.5kb downstream 500 false Scaffold0448: 212497-212996 Salix purpurea
SapurV1A.0448s0110 1.0kb upstream 1.0kb upstream 8182 true Scaffold0448: 204315-212496 Salix purpurea
SapurV1A.0448s0110 1.0kb upstream 1.0kb upstream 1000 false Scaffold0448: 204315-205314 Salix purpurea
SapurV1A.0448s0110 1.0kb downstream 1.0kb downstream 8182 true Scaffold0448: 205315-213496 Salix purpurea
SapurV1A.0448s0110 1.0kb downstream 1.0kb downstream 1000 false Scaffold0448: 212497-213496 Salix purpurea
SapurV1A.0448s0110 2.0kb upstream 2.0kb upstream 9182 true Scaffold0448: 203315-212496 Salix purpurea
SapurV1A.0448s0110 2.0kb upstream 2.0kb upstream 2000 false Scaffold0448: 203315-205314 Salix purpurea
SapurV1A.0448s0110 2.0kb downstream 2.0kb downstream 9182 true Scaffold0448: 205315-214496 Salix purpurea
SapurV1A.0448s0110 2.0kb downstream 2.0kb downstream 2000 false Scaffold0448: 212497-214496 Salix purpurea
SapurV1A.0448s0110 5.0kb upstream 5.0kb upstream 12182 true Scaffold0448: 200315-212496 Salix purpurea
SapurV1A.0448s0110 5.0kb upstream 5.0kb upstream 5000 false Scaffold0448: 200315-205314 Salix purpurea
SapurV1A.0448s0110 5.0kb downstream 5.0kb downstream 12182 true Scaffold0448: 205315-217496 Salix purpurea
SapurV1A.0448s0110 5.0kb downstream 5.0kb downstream 5000 false Scaffold0448: 212497-217496 Salix purpurea
SapurV1A.0448s0110 10.0kb upstream 10.0kb upstream 17182 true Scaffold0448: 195315-212496 Salix purpurea
SapurV1A.0448s0110 10.0kb upstream 10.0kb upstream 10000 false Scaffold0448: 195315-205314 Salix purpurea
SapurV1A.0448s0110 10.0kb downstream 10.0kb downstream 16893 true Scaffold0448: 205315-222207 Salix purpurea
SapurV1A.0448s0110 10.0kb downstream 10.0kb downstream 9711 false Scaffold0448: 212497-222207 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122411853 5262 Malpighiales View MSA
124250789 5268 Malvidae View MSA
124070029 5270 Rosid View MSA
123751253 5271 Pentapetalae View MSA
122792090 5272 Eudicot View MSA
122044388 5273 Angiosperm View MSA
121350650 5274 Embryophyte View MSA
123381837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain