Gene : SapurV1A.1226s0080 S. purpurea v1.0

Defline:  (1 of 44) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  8
Name:  ? SapurV1A.1226s0080 Secondary Identifier:  ? PAC:31450106

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1226s0080 0.5kb upstream 0.5kb upstream 2375 true Scaffold1226: 81974-84348 Salix purpurea
SapurV1A.1226s0080 0.5kb upstream 0.5kb upstream 500 false Scaffold1226: 81974-82473 Salix purpurea
SapurV1A.1226s0080 0.5kb downstream 0.5kb downstream 2375 true Scaffold1226: 82474-84848 Salix purpurea
SapurV1A.1226s0080 0.5kb downstream 0.5kb downstream 500 false Scaffold1226: 84349-84848 Salix purpurea
SapurV1A.1226s0080 1.0kb upstream 1.0kb upstream 2875 true Scaffold1226: 81474-84348 Salix purpurea
SapurV1A.1226s0080 1.0kb upstream 1.0kb upstream 1000 false Scaffold1226: 81474-82473 Salix purpurea
SapurV1A.1226s0080 1.0kb downstream 1.0kb downstream 2875 true Scaffold1226: 82474-85348 Salix purpurea
SapurV1A.1226s0080 1.0kb downstream 1.0kb downstream 1000 false Scaffold1226: 84349-85348 Salix purpurea
SapurV1A.1226s0080 2.0kb upstream 2.0kb upstream 3875 true Scaffold1226: 80474-84348 Salix purpurea
SapurV1A.1226s0080 2.0kb upstream 2.0kb upstream 2000 false Scaffold1226: 80474-82473 Salix purpurea
SapurV1A.1226s0080 2.0kb downstream 2.0kb downstream 3875 true Scaffold1226: 82474-86348 Salix purpurea
SapurV1A.1226s0080 2.0kb downstream 2.0kb downstream 2000 false Scaffold1226: 84349-86348 Salix purpurea
SapurV1A.1226s0080 5.0kb upstream 5.0kb upstream 6875 true Scaffold1226: 77474-84348 Salix purpurea
SapurV1A.1226s0080 5.0kb upstream 5.0kb upstream 5000 false Scaffold1226: 77474-82473 Salix purpurea
SapurV1A.1226s0080 5.0kb downstream 5.0kb downstream 5464 true Scaffold1226: 82474-87937 Salix purpurea
SapurV1A.1226s0080 5.0kb downstream 5.0kb downstream 3589 false Scaffold1226: 84349-87937 Salix purpurea
SapurV1A.1226s0080 10.0kb upstream 10.0kb upstream 11875 true Scaffold1226: 72474-84348 Salix purpurea
SapurV1A.1226s0080 10.0kb upstream 10.0kb upstream 10000 false Scaffold1226: 72474-82473 Salix purpurea
SapurV1A.1226s0080 10.0kb downstream 10.0kb downstream 5464 true Scaffold1226: 82474-87937 Salix purpurea
SapurV1A.1226s0080 10.0kb downstream 10.0kb downstream 3589 false Scaffold1226: 84349-87937 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464022 5262 Malpighiales View MSA
124248581 5268 Malvidae View MSA
124072137 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain