Gene : SapurV1A.1050s0060 S. purpurea v1.0
Defline:  (1 of 54) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) Genomic Order:  6
Name:  ? SapurV1A.1050s0060 Secondary Identifier:  ? PAC:31443542
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1050s0060 0.5kb upstream 0.5kb upstream 2244 true Scaffold1050: 57796-60039 Salix purpurea
SapurV1A.1050s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold1050: 59540-60039 Salix purpurea
SapurV1A.1050s0060 0.5kb downstream 0.5kb downstream 2244 true Scaffold1050: 57296-59539 Salix purpurea
SapurV1A.1050s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold1050: 57296-57795 Salix purpurea
SapurV1A.1050s0060 1.0kb upstream 1.0kb upstream 2744 true Scaffold1050: 57796-60539 Salix purpurea
SapurV1A.1050s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold1050: 59540-60539 Salix purpurea
SapurV1A.1050s0060 1.0kb downstream 1.0kb downstream 2744 true Scaffold1050: 56796-59539 Salix purpurea
SapurV1A.1050s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold1050: 56796-57795 Salix purpurea
SapurV1A.1050s0060 2.0kb upstream 2.0kb upstream 3744 true Scaffold1050: 57796-61539 Salix purpurea
SapurV1A.1050s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold1050: 59540-61539 Salix purpurea
SapurV1A.1050s0060 2.0kb downstream 2.0kb downstream 3744 true Scaffold1050: 55796-59539 Salix purpurea
SapurV1A.1050s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold1050: 55796-57795 Salix purpurea
SapurV1A.1050s0060 5.0kb upstream 5.0kb upstream 6744 true Scaffold1050: 57796-64539 Salix purpurea
SapurV1A.1050s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold1050: 59540-64539 Salix purpurea
SapurV1A.1050s0060 5.0kb downstream 5.0kb downstream 6744 true Scaffold1050: 52796-59539 Salix purpurea
SapurV1A.1050s0060 5.0kb downstream 5.0kb downstream 5000 false Scaffold1050: 52796-57795 Salix purpurea
SapurV1A.1050s0060 10.0kb upstream 10.0kb upstream 11744 true Scaffold1050: 57796-69539 Salix purpurea
SapurV1A.1050s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold1050: 59540-69539 Salix purpurea
SapurV1A.1050s0060 10.0kb downstream 10.0kb downstream 11744 true Scaffold1050: 47796-59539 Salix purpurea
SapurV1A.1050s0060 10.0kb downstream 10.0kb downstream 10000 false Scaffold1050: 47796-57795 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464142 5262 Malpighiales View MSA
124236762 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain