Gene : SapurV1A.1080s0060 S. purpurea v1.0
Defline:  (1 of 3) PTHR12303:SF6 - UPF0586 PROTEIN C9ORF41 Genomic Order:  6
Name:  ? SapurV1A.1080s0060 Secondary Identifier:  ? PAC:31443348
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1080s0060 0.5kb upstream 0.5kb upstream 5399 true Scaffold1080: 80652-86050 Salix purpurea
SapurV1A.1080s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold1080: 85551-86050 Salix purpurea
SapurV1A.1080s0060 0.5kb downstream 0.5kb downstream 5399 true Scaffold1080: 80152-85550 Salix purpurea
SapurV1A.1080s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold1080: 80152-80651 Salix purpurea
SapurV1A.1080s0060 1.0kb upstream 1.0kb upstream 5899 true Scaffold1080: 80652-86550 Salix purpurea
SapurV1A.1080s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold1080: 85551-86550 Salix purpurea
SapurV1A.1080s0060 1.0kb downstream 1.0kb downstream 5899 true Scaffold1080: 79652-85550 Salix purpurea
SapurV1A.1080s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold1080: 79652-80651 Salix purpurea
SapurV1A.1080s0060 2.0kb upstream 2.0kb upstream 6899 true Scaffold1080: 80652-87550 Salix purpurea
SapurV1A.1080s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold1080: 85551-87550 Salix purpurea
SapurV1A.1080s0060 2.0kb downstream 2.0kb downstream 6899 true Scaffold1080: 78652-85550 Salix purpurea
SapurV1A.1080s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold1080: 78652-80651 Salix purpurea
SapurV1A.1080s0060 5.0kb upstream 5.0kb upstream 9899 true Scaffold1080: 80652-90550 Salix purpurea
SapurV1A.1080s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold1080: 85551-90550 Salix purpurea
SapurV1A.1080s0060 5.0kb downstream 5.0kb downstream 9899 true Scaffold1080: 75652-85550 Salix purpurea
SapurV1A.1080s0060 5.0kb downstream 5.0kb downstream 5000 false Scaffold1080: 75652-80651 Salix purpurea
SapurV1A.1080s0060 10.0kb upstream 10.0kb upstream 14899 true Scaffold1080: 80652-95550 Salix purpurea
SapurV1A.1080s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold1080: 85551-95550 Salix purpurea
SapurV1A.1080s0060 10.0kb downstream 10.0kb downstream 14899 true Scaffold1080: 70652-85550 Salix purpurea
SapurV1A.1080s0060 10.0kb downstream 10.0kb downstream 10000 false Scaffold1080: 70652-80651 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122408882 5262 Malpighiales Singleton cluster - no MSA
124204158 5268 Malvidae Singleton cluster - no MSA
123923457 5270 Rosid Singleton cluster - no MSA
123739878 5271 Pentapetalae View MSA
122791925 5272 Eudicot View MSA
122046455 5273 Angiosperm View MSA
121344322 5274 Embryophyte View MSA
123425361 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain