Gene : SapurV1A.1553s0010 S. purpurea v1.0

Defline:  (1 of 2) PTHR11945//PTHR11945:SF200 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1
Name:  ? SapurV1A.1553s0010 Secondary Identifier:  ? PAC:31424372

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1553s0010 0.5kb upstream 0.5kb upstream 12172 true Scaffold1553: 29667-41838 Salix purpurea
SapurV1A.1553s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold1553: 29667-30166 Salix purpurea
SapurV1A.1553s0010 0.5kb downstream 0.5kb downstream 12172 true Scaffold1553: 30167-42338 Salix purpurea
SapurV1A.1553s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold1553: 41839-42338 Salix purpurea
SapurV1A.1553s0010 1.0kb upstream 1.0kb upstream 12672 true Scaffold1553: 29167-41838 Salix purpurea
SapurV1A.1553s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold1553: 29167-30166 Salix purpurea
SapurV1A.1553s0010 1.0kb downstream 1.0kb downstream 12672 true Scaffold1553: 30167-42838 Salix purpurea
SapurV1A.1553s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold1553: 41839-42838 Salix purpurea
SapurV1A.1553s0010 2.0kb upstream 2.0kb upstream 13672 true Scaffold1553: 28167-41838 Salix purpurea
SapurV1A.1553s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold1553: 28167-30166 Salix purpurea
SapurV1A.1553s0010 2.0kb downstream 2.0kb downstream 13672 true Scaffold1553: 30167-43838 Salix purpurea
SapurV1A.1553s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold1553: 41839-43838 Salix purpurea
SapurV1A.1553s0010 5.0kb upstream 5.0kb upstream 16672 true Scaffold1553: 25167-41838 Salix purpurea
SapurV1A.1553s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold1553: 25167-30166 Salix purpurea
SapurV1A.1553s0010 5.0kb downstream 5.0kb downstream 16672 true Scaffold1553: 30167-46838 Salix purpurea
SapurV1A.1553s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold1553: 41839-46838 Salix purpurea
SapurV1A.1553s0010 10.0kb upstream 10.0kb upstream 21672 true Scaffold1553: 20167-41838 Salix purpurea
SapurV1A.1553s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold1553: 20167-30166 Salix purpurea
SapurV1A.1553s0010 10.0kb downstream 10.0kb downstream 21672 true Scaffold1553: 30167-51838 Salix purpurea
SapurV1A.1553s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold1553: 41839-51838 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122407101 5262 Malpighiales Singleton cluster - no MSA
124202600 5268 Malvidae Singleton cluster - no MSA
123922101 5270 Rosid Singleton cluster - no MSA
123753647 5271 Pentapetalae View MSA
122786853 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain