Gene : SapurV1A.1379s0020 S. purpurea v1.0
Defline:  (1 of 2) PTHR11624:SF76 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATED Genomic Order:  2
Name:  ? SapurV1A.1379s0020 Secondary Identifier:  ? PAC:31402329
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-5173 Salix purpurea pathologic  
Spurpurea PWY-5464 Salix purpurea pathologic  
Spurpurea PYRUVDEHYD-PWY Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1379s0020 0.5kb upstream 0.5kb upstream 3510 true Scaffold1379: 33356-36865 Salix purpurea
SapurV1A.1379s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold1379: 36366-36865 Salix purpurea
SapurV1A.1379s0020 0.5kb downstream 0.5kb downstream 3510 true Scaffold1379: 32856-36365 Salix purpurea
SapurV1A.1379s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold1379: 32856-33355 Salix purpurea
SapurV1A.1379s0020 1.0kb upstream 1.0kb upstream 4010 true Scaffold1379: 33356-37365 Salix purpurea
SapurV1A.1379s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold1379: 36366-37365 Salix purpurea
SapurV1A.1379s0020 1.0kb downstream 1.0kb downstream 4010 true Scaffold1379: 32356-36365 Salix purpurea
SapurV1A.1379s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold1379: 32356-33355 Salix purpurea
SapurV1A.1379s0020 2.0kb upstream 2.0kb upstream 5010 true Scaffold1379: 33356-38365 Salix purpurea
SapurV1A.1379s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold1379: 36366-38365 Salix purpurea
SapurV1A.1379s0020 2.0kb downstream 2.0kb downstream 5010 true Scaffold1379: 31356-36365 Salix purpurea
SapurV1A.1379s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold1379: 31356-33355 Salix purpurea
SapurV1A.1379s0020 5.0kb upstream 5.0kb upstream 8010 true Scaffold1379: 33356-41365 Salix purpurea
SapurV1A.1379s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold1379: 36366-41365 Salix purpurea
SapurV1A.1379s0020 5.0kb downstream 5.0kb downstream 8010 true Scaffold1379: 28356-36365 Salix purpurea
SapurV1A.1379s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold1379: 28356-33355 Salix purpurea
SapurV1A.1379s0020 10.0kb upstream 10.0kb upstream 13010 true Scaffold1379: 33356-46365 Salix purpurea
SapurV1A.1379s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold1379: 36366-46365 Salix purpurea
SapurV1A.1379s0020 10.0kb downstream 10.0kb downstream 13010 true Scaffold1379: 23356-36365 Salix purpurea
SapurV1A.1379s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold1379: 23356-33355 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464907 5262 Malpighiales View MSA
124241225 5268 Malvidae View MSA
124062960 5270 Rosid View MSA
123741192 5271 Pentapetalae View MSA
122797029 5272 Eudicot View MSA
122045305 5273 Angiosperm View MSA
121346397 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain