Gene : SapurV1A.1337s0050 S. purpurea v1.0

Defline:  (1 of 1) PTHR13068:SF9 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN Genomic Order:  5
Name:  ? SapurV1A.1337s0050 Secondary Identifier:  ? PAC:31423154

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1337s0050 0.5kb upstream 0.5kb upstream 4392 true Scaffold1337: 40478-44869 Salix purpurea
SapurV1A.1337s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold1337: 44370-44869 Salix purpurea
SapurV1A.1337s0050 0.5kb downstream 0.5kb downstream 4392 true Scaffold1337: 39978-44369 Salix purpurea
SapurV1A.1337s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold1337: 39978-40477 Salix purpurea
SapurV1A.1337s0050 1.0kb upstream 1.0kb upstream 4892 true Scaffold1337: 40478-45369 Salix purpurea
SapurV1A.1337s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold1337: 44370-45369 Salix purpurea
SapurV1A.1337s0050 1.0kb downstream 1.0kb downstream 4892 true Scaffold1337: 39478-44369 Salix purpurea
SapurV1A.1337s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold1337: 39478-40477 Salix purpurea
SapurV1A.1337s0050 2.0kb upstream 2.0kb upstream 5892 true Scaffold1337: 40478-46369 Salix purpurea
SapurV1A.1337s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold1337: 44370-46369 Salix purpurea
SapurV1A.1337s0050 2.0kb downstream 2.0kb downstream 5892 true Scaffold1337: 38478-44369 Salix purpurea
SapurV1A.1337s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold1337: 38478-40477 Salix purpurea
SapurV1A.1337s0050 5.0kb upstream 5.0kb upstream 8892 true Scaffold1337: 40478-49369 Salix purpurea
SapurV1A.1337s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold1337: 44370-49369 Salix purpurea
SapurV1A.1337s0050 5.0kb downstream 5.0kb downstream 8892 true Scaffold1337: 35478-44369 Salix purpurea
SapurV1A.1337s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold1337: 35478-40477 Salix purpurea
SapurV1A.1337s0050 10.0kb upstream 10.0kb upstream 13892 true Scaffold1337: 40478-54369 Salix purpurea
SapurV1A.1337s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold1337: 44370-54369 Salix purpurea
SapurV1A.1337s0050 10.0kb downstream 10.0kb downstream 13892 true Scaffold1337: 30478-44369 Salix purpurea
SapurV1A.1337s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold1337: 30478-40477 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452581 5262 Malpighiales View MSA
124242884 5268 Malvidae View MSA
124067204 5270 Rosid View MSA
123739084 5271 Pentapetalae View MSA
122788457 5272 Eudicot View MSA
122042803 5273 Angiosperm View MSA
121347478 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain