Gene : SapurV1A.2107s0020 S. purpurea v1.0
Defline:  (1 of 44) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  2
Name:  ? SapurV1A.2107s0020 Secondary Identifier:  ? PAC:31430111
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2107s0020 0.5kb upstream 0.5kb upstream 2172 true Scaffold2107: 15615-17786 Salix purpurea
SapurV1A.2107s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold2107: 15615-16114 Salix purpurea
SapurV1A.2107s0020 0.5kb downstream 0.5kb downstream 2172 true Scaffold2107: 16115-18286 Salix purpurea
SapurV1A.2107s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold2107: 17787-18286 Salix purpurea
SapurV1A.2107s0020 1.0kb upstream 1.0kb upstream 2672 true Scaffold2107: 15115-17786 Salix purpurea
SapurV1A.2107s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold2107: 15115-16114 Salix purpurea
SapurV1A.2107s0020 1.0kb downstream 1.0kb downstream 2672 true Scaffold2107: 16115-18786 Salix purpurea
SapurV1A.2107s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold2107: 17787-18786 Salix purpurea
SapurV1A.2107s0020 2.0kb upstream 2.0kb upstream 3672 true Scaffold2107: 14115-17786 Salix purpurea
SapurV1A.2107s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold2107: 14115-16114 Salix purpurea
SapurV1A.2107s0020 2.0kb downstream 2.0kb downstream 3672 true Scaffold2107: 16115-19786 Salix purpurea
SapurV1A.2107s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold2107: 17787-19786 Salix purpurea
SapurV1A.2107s0020 5.0kb upstream 5.0kb upstream 6672 true Scaffold2107: 11115-17786 Salix purpurea
SapurV1A.2107s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold2107: 11115-16114 Salix purpurea
SapurV1A.2107s0020 5.0kb downstream 5.0kb downstream 6672 true Scaffold2107: 16115-22786 Salix purpurea
SapurV1A.2107s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold2107: 17787-22786 Salix purpurea
SapurV1A.2107s0020 10.0kb upstream 10.0kb upstream 11672 true Scaffold2107: 6115-17786 Salix purpurea
SapurV1A.2107s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold2107: 6115-16114 Salix purpurea
SapurV1A.2107s0020 10.0kb downstream 10.0kb downstream 11672 true Scaffold2107: 16115-27786 Salix purpurea
SapurV1A.2107s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold2107: 17787-27786 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452614 5262 Malpighiales View MSA
124248581 5268 Malvidae View MSA
124072137 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain