Gene : SapurV1A.1741s0040 S. purpurea v1.0

Defline:  (1 of 4) K13091 - RNA-binding protein 39 (RBM39, RNPC2) Genomic Order:  4
Name:  ? SapurV1A.1741s0040 Secondary Identifier:  ? PAC:31450355

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1741s0040 0.5kb upstream 0.5kb upstream 8940 true Scaffold1741: 10527-19466 Salix purpurea
SapurV1A.1741s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold1741: 18967-19466 Salix purpurea
SapurV1A.1741s0040 0.5kb downstream 0.5kb downstream 8940 true Scaffold1741: 10027-18966 Salix purpurea
SapurV1A.1741s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold1741: 10027-10526 Salix purpurea
SapurV1A.1741s0040 1.0kb upstream 1.0kb upstream 9440 true Scaffold1741: 10527-19966 Salix purpurea
SapurV1A.1741s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold1741: 18967-19966 Salix purpurea
SapurV1A.1741s0040 1.0kb downstream 1.0kb downstream 9440 true Scaffold1741: 9527-18966 Salix purpurea
SapurV1A.1741s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold1741: 9527-10526 Salix purpurea
SapurV1A.1741s0040 2.0kb upstream 2.0kb upstream 10440 true Scaffold1741: 10527-20966 Salix purpurea
SapurV1A.1741s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold1741: 18967-20966 Salix purpurea
SapurV1A.1741s0040 2.0kb downstream 2.0kb downstream 10440 true Scaffold1741: 8527-18966 Salix purpurea
SapurV1A.1741s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold1741: 8527-10526 Salix purpurea
SapurV1A.1741s0040 5.0kb upstream 5.0kb upstream 13440 true Scaffold1741: 10527-23966 Salix purpurea
SapurV1A.1741s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold1741: 18967-23966 Salix purpurea
SapurV1A.1741s0040 5.0kb downstream 5.0kb downstream 13440 true Scaffold1741: 5527-18966 Salix purpurea
SapurV1A.1741s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold1741: 5527-10526 Salix purpurea
SapurV1A.1741s0040 10.0kb upstream 10.0kb upstream 18440 true Scaffold1741: 10527-28966 Salix purpurea
SapurV1A.1741s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold1741: 18967-28966 Salix purpurea
SapurV1A.1741s0040 10.0kb downstream 10.0kb downstream 18440 true Scaffold1741: 527-18966 Salix purpurea
SapurV1A.1741s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold1741: 527-10526 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450102 5262 Malpighiales View MSA
124240263 5268 Malvidae View MSA
124068608 5270 Rosid View MSA
123744979 5271 Pentapetalae View MSA
122786536 5272 Eudicot View MSA
122047022 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121344314 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain