Protein Family : Splicing factor, CC1-like 123744979

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  92

92 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30183.t000027 (1 of 1) K13091 - RNA-binding protein 39 (RBM39, RNPC2) R. communis v0.1 9873   30183: 459700-469572
Cucsa.101320 (1 of 2) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE C. sativus v1.0 8028   scaffold00927: 583415-591442
Cucsa.370400 (1 of 2) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE C. sativus v1.0 11170   scaffold03678: 128061-139230
orange1.1g006398m.g (1 of 1) KOG0147 - Transcriptional coactivator CAPER (RRM superfamily) C. sinensis v1.1 8238   scaffold00023: 741173-749410
orange1.1g006380m.g (1 of 2) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE C. sinensis v1.1 7454   scaffold00094: 338356-345809
AT5G09880 (1 of 1) PTHR24012//PTHR24012:SF361 - FAMILY NOT NAMED // SPLICING FACTOR, CC1-LIKE A. thaliana TAIR10 3823   Chr5: 3081442-3085264
AT2G16940 (1 of 1) PTHR24012:SF388 - SPLICING FACTOR, CC1-LIKE PROTEIN A. thaliana TAIR10 4802   Chr2: 7342607-7347408
Thhalv10022624m.g (1 of 1) PTHR24012:SF388 - SPLICING FACTOR, CC1-LIKE PROTEIN E. salsugineum v1.0 4583   scaffold_11: 2544336-2548918
Thhalv10013005m.g (1 of 1) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE E. salsugineum v1.0 4975   scaffold_2: 3119657-3124631
Ciclev10027985m.g (1 of 1) KOG0147 - Transcriptional coactivator CAPER (RRM superfamily) C. clementina v1.0 8192   scaffold_8: 746162-754353
Ciclev10025229m.g (1 of 1) KOG0124 - Polypyrimidine tract-binding protein PUF60 (RRM superfamily) C. clementina v1.0 7484   scaffold_7: 17580508-17587991
Lus10027830.g (1 of 6) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE L. usitatissimum v1.0 5382   scaffold1143: 554700-560081
Lus10005059.g (1 of 6) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE L. usitatissimum v1.0 5789   scaffold1982: 138590-144378
Lus10025075.g (1 of 6) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE L. usitatissimum v1.0 4919   scaffold305: 126090-131008
Lus10034466.g (1 of 6) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE L. usitatissimum v1.0 4944   scaffold310: 1464843-1469786
Lus10002093.g (1 of 6) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE L. usitatissimum v1.0 4221   scaffold575: 51871-56091
Lus10000826.g (1 of 6) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE L. usitatissimum v1.0 4164   scaffold786: 5658-9821
Gorai.002G002300 (1 of 4) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE G. raimondii v2.1 7206   Chr02: 127248-134453
Gorai.002G149800 (1 of 4) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE G. raimondii v2.1 6818   Chr02: 29118873-29125690
Gorai.003G049000 (1 of 1) KOG0124 - Polypyrimidine tract-binding protein PUF60 (RRM superfamily) G. raimondii v2.1 6190   Chr03: 6859381-6865570
Gorai.005G254800 (1 of 4) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE G. raimondii v2.1 8896   Chr05: 63214150-63223045
Thecc1EG001305 (1 of 2) K13091 - RNA-binding protein 39 (RBM39, RNPC2) T. cacao v1.1 7124   scaffold_1: 6418668-6425791
Thecc1EG006592 (1 of 2) K13091 - RNA-binding protein 39 (RBM39, RNPC2) T. cacao v1.1 8177   scaffold_2: 2868150-2876326
Migut.L00053 (1 of 3) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE M. guttatus v2.0 6997   scaffold_12: 363914-370910
Migut.B00067 (1 of 1) PF00076//PF13893//PF15519 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_5) // linker between RRM2 and RRM3 domains in RBM39 protein (RBM39linker) M. guttatus v2.0 6032   scaffold_2: 324412-330443
Araha.6262s0009 (1 of 1) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE A. halleri v1.1 3870   Scaffold6262: 24427-28296
Araha.32879s0001 (1 of 1) PTHR24012:SF388 - SPLICING FACTOR, CC1-LIKE PROTEIN A. halleri v1.1 4378   Scaffold32879: 3868-8245
Cagra.1085s0070 (1 of 1) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE C. grandiflora v1.1 3914   Scaffold1085: 263032-266945
Cagra.3353s0001 (1 of 1) PTHR24012:SF388 - SPLICING FACTOR, CC1-LIKE PROTEIN C. grandiflora v1.1 4239   Scaffold3353: 3-4241
Glyma.05G187000 (1 of 2) PF00076//PF15519 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // linker between RRM2 and RRM3 domains in RBM39 protein (RBM39linker) G. max Wm82.a2.v1 8056   Chr05: 37340520-37348575

92 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30183.m001297 R. communis v0.1 123744979 Splicing factor, CC1-like 1 5271 Pentapetalae
orange1.1g006398m C. sinensis v1.1 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
Thhalv10022624m E. salsugineum v1.0 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
Ciclev10025229m C. clementina v1.0 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
Ciclev10027985m C. clementina v1.0 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
Gorai.003G049000.1 G. raimondii v2.1 123744979 Splicing factor, CC1-like 4 5271 Pentapetalae
Thecc1EG006592t1 T. cacao v1.1 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
Migut.B00067.1.p M. guttatus v2.0 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
Glyma.10G282400.1.p G. max Wm82.a2.v1 123744979 Splicing factor, CC1-like 5 5271 Pentapetalae
Glyma.20G107100.1.p G. max Wm82.a2.v1 123744979 Splicing factor, CC1-like 5 5271 Pentapetalae
Glyma.08G145400.1.p G. max Wm82.a2.v1 123744979 Splicing factor, CC1-like 5 5271 Pentapetalae
Glyma.06G148700.1.p G. max Wm82.a2.v1 123744979 Splicing factor, CC1-like 5 5271 Pentapetalae
Brara.B00333.1.p B. rapa FPsc v1.3 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
Medtr3g095230.1 M. truncatula Mt4.0v1 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
Medtr8g092550.1 M. truncatula Mt4.0v1 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
Prupe.8G167800.1.p P. persica v2.1 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
Prupe.6G161000.1.p P. persica v2.1 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
Kalax.0045s0134.1.p K. laxiflora v1.1 123744979 Splicing factor, CC1-like 4 5271 Pentapetalae
Kalax.0606s0015.1.p K. laxiflora v1.1 123744979 Splicing factor, CC1-like 4 5271 Pentapetalae
Kaladp0026s0133.1.p K. fedtschenkoi v1.1 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
Kaladp0337s0010.1.p K. fedtschenkoi v1.1 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
AL6G20300.t1 A. lyrata v2.1 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
Tp57577_TGAC_v2_mRNA2280 T. pratense v2 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
DCAR_003181 D. carota v2.0 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
DCAR_001388 D. carota v2.0 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
Solyc11g005170.1.1 S. lycopersicum ITAG2.4 123744979 Splicing factor, CC1-like 1 5271 Pentapetalae
AUR62013011-RA C. quinoa v1.0 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
AUR62017946-RA C. quinoa v1.0 123744979 Splicing factor, CC1-like 2 5271 Pentapetalae
Potri.004G177000.1.p P. trichocarpa v3.1 123744979 Splicing factor, CC1-like 4 5271 Pentapetalae
Potri.007G009800.1.p P. trichocarpa v3.1 123744979 Splicing factor, CC1-like 4 5271 Pentapetalae