Gene : Cagra.1085s0070 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE Genomic Order:  70
Name:  ? Cagra.1085s0070 Secondary Identifier:  ? PAC:28900591
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1085s0070 0.5kb upstream 0.5kb upstream 4414 true Scaffold1085: 262532-266945 Capsella grandiflora
Cagra.1085s0070 0.5kb upstream 0.5kb upstream 500 false Scaffold1085: 262532-263031 Capsella grandiflora
Cagra.1085s0070 0.5kb downstream 0.5kb downstream 4414 true Scaffold1085: 263032-267445 Capsella grandiflora
Cagra.1085s0070 0.5kb downstream 0.5kb downstream 500 false Scaffold1085: 266946-267445 Capsella grandiflora
Cagra.1085s0070 1.0kb upstream 1.0kb upstream 4914 true Scaffold1085: 262032-266945 Capsella grandiflora
Cagra.1085s0070 1.0kb upstream 1.0kb upstream 1000 false Scaffold1085: 262032-263031 Capsella grandiflora
Cagra.1085s0070 1.0kb downstream 1.0kb downstream 4914 true Scaffold1085: 263032-267945 Capsella grandiflora
Cagra.1085s0070 1.0kb downstream 1.0kb downstream 1000 false Scaffold1085: 266946-267945 Capsella grandiflora
Cagra.1085s0070 2.0kb upstream 2.0kb upstream 5914 true Scaffold1085: 261032-266945 Capsella grandiflora
Cagra.1085s0070 2.0kb upstream 2.0kb upstream 2000 false Scaffold1085: 261032-263031 Capsella grandiflora
Cagra.1085s0070 2.0kb downstream 2.0kb downstream 5914 true Scaffold1085: 263032-268945 Capsella grandiflora
Cagra.1085s0070 2.0kb downstream 2.0kb downstream 2000 false Scaffold1085: 266946-268945 Capsella grandiflora
Cagra.1085s0070 5.0kb upstream 5.0kb upstream 8914 true Scaffold1085: 258032-266945 Capsella grandiflora
Cagra.1085s0070 5.0kb upstream 5.0kb upstream 5000 false Scaffold1085: 258032-263031 Capsella grandiflora
Cagra.1085s0070 5.0kb downstream 5.0kb downstream 8914 true Scaffold1085: 263032-271945 Capsella grandiflora
Cagra.1085s0070 5.0kb downstream 5.0kb downstream 5000 false Scaffold1085: 266946-271945 Capsella grandiflora
Cagra.1085s0070 10.0kb upstream 10.0kb upstream 13914 true Scaffold1085: 253032-266945 Capsella grandiflora
Cagra.1085s0070 10.0kb upstream 10.0kb upstream 10000 false Scaffold1085: 253032-263031 Capsella grandiflora
Cagra.1085s0070 10.0kb downstream 10.0kb downstream 13914 true Scaffold1085: 263032-276945 Capsella grandiflora
Cagra.1085s0070 10.0kb downstream 10.0kb downstream 10000 false Scaffold1085: 266946-276945 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374613 5261 Brassicaceae View MSA
123832909 5264 Brassicales-Malvales View MSA
124351018 5266 SBM View MSA
124247466 5268 Malvidae View MSA
124068608 5270 Rosid View MSA
123744979 5271 Pentapetalae View MSA
122786536 5272 Eudicot View MSA
122047022 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121344314 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain