Protein Family : Splicing factor, CC1-like 124247466

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  20

20 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g006380m.g (1 of 2) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE C. sinensis v1.1 7454   scaffold00094: 338356-345809
AT5G09880 (1 of 1) PTHR24012//PTHR24012:SF361 - FAMILY NOT NAMED // SPLICING FACTOR, CC1-LIKE A. thaliana TAIR10 3823   Chr5: 3081442-3085264
Thhalv10013005m.g (1 of 1) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE E. salsugineum v1.0 4975   scaffold_2: 3119657-3124631
Ciclev10025229m.g (1 of 1) KOG0124 - Polypyrimidine tract-binding protein PUF60 (RRM superfamily) C. clementina v1.0 7484   scaffold_7: 17580508-17587991
Lus10002093.g (1 of 6) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE L. usitatissimum v1.0 4221   scaffold575: 51871-56091
Lus10000826.g (1 of 6) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE L. usitatissimum v1.0 4164   scaffold786: 5658-9821
Gorai.002G149800 (1 of 4) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE G. raimondii v2.1 6818   Chr02: 29118873-29125690
Gorai.003G049000 (1 of 1) KOG0124 - Polypyrimidine tract-binding protein PUF60 (RRM superfamily) G. raimondii v2.1 6190   Chr03: 6859381-6865570
Thecc1EG001305 (1 of 2) K13091 - RNA-binding protein 39 (RBM39, RNPC2) T. cacao v1.1 7124   scaffold_1: 6418668-6425791
Araha.6262s0009 (1 of 1) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE A. halleri v1.1 3870   Scaffold6262: 24427-28296
Cagra.1085s0070 (1 of 1) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE C. grandiflora v1.1 3914   Scaffold1085: 263032-266945
Brara.B00333 (1 of 2) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE B. rapa FPsc v1.3 3556   A02: 1555910-1559465
Bostr.13129s0003 (1 of 1) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE B. stricta v1.2 3964   Scaffold13129: 11659-15622
SapurV1A.0513s0050 (1 of 1) KOG0131//KOG0145//KOG0147 - Splicing factor 3b, subunit 4 // RNA-binding protein ELAV/HU (RRM superfamily) // Transcriptional coactivator CAPER (RRM superfamily) S. purpurea v1.0 10026   chr05: 11557367-11567392
AL6G20300 (1 of 1) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE A. lyrata v2.1 3916   scaffold_6: 3904249-3908164
Potri.005G148100 (1 of 3) K13091 - RNA-binding protein 39 (RBM39, RNPC2) P. trichocarpa v3.1 9832   Chr05: 13079956-13089787
Potri.007G009800 (1 of 5) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE P. trichocarpa v3.1 11296   Chr07: 770616-781911
Podel.07G011900 (1 of 5) PTHR24012:SF361 - SPLICING FACTOR, CC1-LIKE P. deltoides WV94 v2.1 10836   Chr07: 980198-991033
Podel.05G160500 (1 of 3) K13091 - RNA-binding protein 39 (RBM39, RNPC2) P. deltoides WV94 v2.1 10042   Chr05: 14285524-14295565
Carub.0006s0832 (1 of 1) PTHR24012//PTHR24012:SF361 - FAMILY NOT NAMED // SPLICING FACTOR, CC1-LIKE C. rubella v1.1 3949   scaffold_6: 3026536-3030484

20 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Ciclev10025229m C. clementina v1.0 124247466 Splicing factor, CC1-like 1 5268 Malvidae
Gorai.003G049000.1 G. raimondii v2.1 124247466 Splicing factor, CC1-like 2 5268 Malvidae
Brara.B00333.1.p B. rapa FPsc v1.3 124247466 Splicing factor, CC1-like 1 5268 Malvidae
AL6G20300.t1 A. lyrata v2.1 124247466 Splicing factor, CC1-like 1 5268 Malvidae
Potri.007G009800.1.p P. trichocarpa v3.1 124247466 Splicing factor, CC1-like 2 5268 Malvidae
orange1.1g006380m C. sinensis v1.1 124247466 Splicing factor, CC1-like 1 5268 Malvidae
AT5G09880.1 A. thaliana TAIR10 124247466 Splicing factor, CC1-like 1 5268 Malvidae
Thhalv10013005m E. salsugineum v1.0 124247466 Splicing factor, CC1-like 1 5268 Malvidae
Lus10002093 L. usitatissimum v1.0 124247466 Splicing factor, CC1-like 2 5268 Malvidae
Lus10000826 L. usitatissimum v1.0 124247466 Splicing factor, CC1-like 2 5268 Malvidae
Gorai.002G149800.1 G. raimondii v2.1 124247466 Splicing factor, CC1-like 2 5268 Malvidae
Thecc1EG001305t1 T. cacao v1.1 124247466 Splicing factor, CC1-like 1 5268 Malvidae
Araha.6262s0009.1.p A. halleri v1.1 124247466 Splicing factor, CC1-like 1 5268 Malvidae
Cagra.1085s0070.1.p C. grandiflora v1.1 124247466 Splicing factor, CC1-like 1 5268 Malvidae
Bostr.13129s0003.1.p B. stricta v1.2 124247466 Splicing factor, CC1-like 1 5268 Malvidae
SapurV1A.0513s0050.1.p S. purpurea v1.0 124247466 Splicing factor, CC1-like 1 5268 Malvidae
Potri.005G148100.1.p P. trichocarpa v3.1 124247466 Splicing factor, CC1-like 2 5268 Malvidae
Podel.05G160500.1.p P. deltoides WV94 v2.1 124247466 Splicing factor, CC1-like 2 5268 Malvidae
Podel.07G011900.1.p P. deltoides WV94 v2.1 124247466 Splicing factor, CC1-like 2 5268 Malvidae
Carub.0006s0832.1.p C. rubella v1.1 124247466 Splicing factor, CC1-like 1 5268 Malvidae