Gene : SapurV1A.2381s0010 S. purpurea v1.0

Defline:  (1 of 4) PTHR24064:SF271 - ORGANIC CATION/CARNITINE TRANSPORTER 1 Genomic Order:  1
Name:  ? SapurV1A.2381s0010 Secondary Identifier:  ? PAC:31412246

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2381s0010 0.5kb upstream 0.5kb upstream 2542 true Scaffold2381: 4431-6972 Salix purpurea
SapurV1A.2381s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold2381: 6473-6972 Salix purpurea
SapurV1A.2381s0010 0.5kb downstream 0.5kb downstream 2542 true Scaffold2381: 3931-6472 Salix purpurea
SapurV1A.2381s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold2381: 3931-4430 Salix purpurea
SapurV1A.2381s0010 1.0kb upstream 1.0kb upstream 3042 true Scaffold2381: 4431-7472 Salix purpurea
SapurV1A.2381s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold2381: 6473-7472 Salix purpurea
SapurV1A.2381s0010 1.0kb downstream 1.0kb downstream 3042 true Scaffold2381: 3431-6472 Salix purpurea
SapurV1A.2381s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold2381: 3431-4430 Salix purpurea
SapurV1A.2381s0010 2.0kb upstream 2.0kb upstream 4042 true Scaffold2381: 4431-8472 Salix purpurea
SapurV1A.2381s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold2381: 6473-8472 Salix purpurea
SapurV1A.2381s0010 2.0kb downstream 2.0kb downstream 4042 true Scaffold2381: 2431-6472 Salix purpurea
SapurV1A.2381s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold2381: 2431-4430 Salix purpurea
SapurV1A.2381s0010 5.0kb upstream 5.0kb upstream 7042 true Scaffold2381: 4431-11472 Salix purpurea
SapurV1A.2381s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold2381: 6473-11472 Salix purpurea
SapurV1A.2381s0010 5.0kb downstream 5.0kb downstream 6472 true Scaffold2381: 1-6472 Salix purpurea
SapurV1A.2381s0010 5.0kb downstream 5.0kb downstream 4430 false Scaffold2381: 1-4430 Salix purpurea
SapurV1A.2381s0010 10.0kb upstream 10.0kb upstream 12042 true Scaffold2381: 4431-16472 Salix purpurea
SapurV1A.2381s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold2381: 6473-16472 Salix purpurea
SapurV1A.2381s0010 10.0kb downstream 10.0kb downstream 6472 true Scaffold2381: 1-6472 Salix purpurea
SapurV1A.2381s0010 10.0kb downstream 10.0kb downstream 4430 false Scaffold2381: 1-4430 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464827 5262 Malpighiales View MSA
124238119 5268 Malvidae View MSA
124060950 5270 Rosid View MSA
123752944 5271 Pentapetalae View MSA
122793409 5272 Eudicot View MSA
122049028 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121351070 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain