Gene : SapurV1A.0001s0240 S. purpurea v1.0
Defline:  (1 of 2) PTHR11954:SF25 - LS1-LIKE PROTEIN Genomic Order:  888
Name:  ? SapurV1A.0001s0240 Secondary Identifier:  ? PAC:31410190
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-6498 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0001s0240 0.5kb upstream 0.5kb upstream 2889 true chr06: 7420239-7423127 Salix purpurea
SapurV1A.0001s0240 0.5kb upstream 0.5kb upstream 500 false chr06: 7422628-7423127 Salix purpurea
SapurV1A.0001s0240 0.5kb downstream 0.5kb downstream 2889 true chr06: 7419739-7422627 Salix purpurea
SapurV1A.0001s0240 0.5kb downstream 0.5kb downstream 500 false chr06: 7419739-7420238 Salix purpurea
SapurV1A.0001s0240 1.0kb upstream 1.0kb upstream 3389 true chr06: 7420239-7423627 Salix purpurea
SapurV1A.0001s0240 1.0kb upstream 1.0kb upstream 1000 false chr06: 7422628-7423627 Salix purpurea
SapurV1A.0001s0240 1.0kb downstream 1.0kb downstream 3389 true chr06: 7419239-7422627 Salix purpurea
SapurV1A.0001s0240 1.0kb downstream 1.0kb downstream 1000 false chr06: 7419239-7420238 Salix purpurea
SapurV1A.0001s0240 2.0kb upstream 2.0kb upstream 4389 true chr06: 7420239-7424627 Salix purpurea
SapurV1A.0001s0240 2.0kb upstream 2.0kb upstream 2000 false chr06: 7422628-7424627 Salix purpurea
SapurV1A.0001s0240 2.0kb downstream 2.0kb downstream 4389 true chr06: 7418239-7422627 Salix purpurea
SapurV1A.0001s0240 2.0kb downstream 2.0kb downstream 2000 false chr06: 7418239-7420238 Salix purpurea
SapurV1A.0001s0240 5.0kb upstream 5.0kb upstream 7389 true chr06: 7420239-7427627 Salix purpurea
SapurV1A.0001s0240 5.0kb upstream 5.0kb upstream 5000 false chr06: 7422628-7427627 Salix purpurea
SapurV1A.0001s0240 5.0kb downstream 5.0kb downstream 7389 true chr06: 7415239-7422627 Salix purpurea
SapurV1A.0001s0240 5.0kb downstream 5.0kb downstream 5000 false chr06: 7415239-7420238 Salix purpurea
SapurV1A.0001s0240 10.0kb upstream 10.0kb upstream 12389 true chr06: 7420239-7432627 Salix purpurea
SapurV1A.0001s0240 10.0kb upstream 10.0kb upstream 10000 false chr06: 7422628-7432627 Salix purpurea
SapurV1A.0001s0240 10.0kb downstream 10.0kb downstream 12389 true chr06: 7410239-7422627 Salix purpurea
SapurV1A.0001s0240 10.0kb downstream 10.0kb downstream 10000 false chr06: 7410239-7420238 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026284 5273 Angiosperm View MSA
122405925 5262 Malpighiales Singleton cluster - no MSA
124250805 5268 Malvidae View MSA
124069445 5270 Rosid View MSA
123741534 5271 Pentapetalae View MSA
122794012 5272 Eudicot View MSA
121349175 5274 Embryophyte View MSA
123424544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain