Gene : SapurV1A.0272s0040 S. purpurea v1.0
Defline:  (1 of 6) PTHR10543//PTHR10543:SF30 - BETA-CAROTENE DIOXYGENASE // SUBFAMILY NOT NAMED Genomic Order:  1889
Name:  ? SapurV1A.0272s0040 Secondary Identifier:  ? PAC:31409147
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-695 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0272s0040 0.5kb upstream 0.5kb upstream 4174 true chr06: 22937044-22941217 Salix purpurea
SapurV1A.0272s0040 0.5kb upstream 0.5kb upstream 500 false chr06: 22937044-22937543 Salix purpurea
SapurV1A.0272s0040 0.5kb downstream 0.5kb downstream 4174 true chr06: 22937544-22941717 Salix purpurea
SapurV1A.0272s0040 0.5kb downstream 0.5kb downstream 500 false chr06: 22941218-22941717 Salix purpurea
SapurV1A.0272s0040 1.0kb upstream 1.0kb upstream 4674 true chr06: 22936544-22941217 Salix purpurea
SapurV1A.0272s0040 1.0kb upstream 1.0kb upstream 1000 false chr06: 22936544-22937543 Salix purpurea
SapurV1A.0272s0040 1.0kb downstream 1.0kb downstream 4674 true chr06: 22937544-22942217 Salix purpurea
SapurV1A.0272s0040 1.0kb downstream 1.0kb downstream 1000 false chr06: 22941218-22942217 Salix purpurea
SapurV1A.0272s0040 2.0kb upstream 2.0kb upstream 5674 true chr06: 22935544-22941217 Salix purpurea
SapurV1A.0272s0040 2.0kb upstream 2.0kb upstream 2000 false chr06: 22935544-22937543 Salix purpurea
SapurV1A.0272s0040 2.0kb downstream 2.0kb downstream 5674 true chr06: 22937544-22943217 Salix purpurea
SapurV1A.0272s0040 2.0kb downstream 2.0kb downstream 2000 false chr06: 22941218-22943217 Salix purpurea
SapurV1A.0272s0040 5.0kb upstream 5.0kb upstream 8674 true chr06: 22932544-22941217 Salix purpurea
SapurV1A.0272s0040 5.0kb upstream 5.0kb upstream 5000 false chr06: 22932544-22937543 Salix purpurea
SapurV1A.0272s0040 5.0kb downstream 5.0kb downstream 8674 true chr06: 22937544-22946217 Salix purpurea
SapurV1A.0272s0040 5.0kb downstream 5.0kb downstream 5000 false chr06: 22941218-22946217 Salix purpurea
SapurV1A.0272s0040 10.0kb upstream 10.0kb upstream 13674 true chr06: 22927544-22941217 Salix purpurea
SapurV1A.0272s0040 10.0kb upstream 10.0kb upstream 10000 false chr06: 22927544-22937543 Salix purpurea
SapurV1A.0272s0040 10.0kb downstream 10.0kb downstream 13674 true chr06: 22937544-22951217 Salix purpurea
SapurV1A.0272s0040 10.0kb downstream 10.0kb downstream 10000 false chr06: 22941218-22951217 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456525 5262 Malpighiales View MSA
124246521 5268 Malvidae View MSA
124074147 5270 Rosid View MSA
123748697 5271 Pentapetalae View MSA
122795171 5272 Eudicot View MSA
122051607 5273 Angiosperm View MSA
121349725 5274 Embryophyte View MSA
123381417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain