Gene : SapurV1A.0319s0010 S. purpurea v1.0
Defline:  (1 of 5) PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Genomic Order:  1602
Name:  ? SapurV1A.0319s0010 Secondary Identifier:  ? PAC:31408669
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-7511 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0319s0010 0.5kb upstream 0.5kb upstream 1742 true chr06: 20328375-20330116 Salix purpurea
SapurV1A.0319s0010 0.5kb upstream 0.5kb upstream 500 false chr06: 20329617-20330116 Salix purpurea
SapurV1A.0319s0010 0.5kb downstream 0.5kb downstream 1742 true chr06: 20327875-20329616 Salix purpurea
SapurV1A.0319s0010 0.5kb downstream 0.5kb downstream 500 false chr06: 20327875-20328374 Salix purpurea
SapurV1A.0319s0010 1.0kb upstream 1.0kb upstream 2242 true chr06: 20328375-20330616 Salix purpurea
SapurV1A.0319s0010 1.0kb upstream 1.0kb upstream 1000 false chr06: 20329617-20330616 Salix purpurea
SapurV1A.0319s0010 1.0kb downstream 1.0kb downstream 2242 true chr06: 20327375-20329616 Salix purpurea
SapurV1A.0319s0010 1.0kb downstream 1.0kb downstream 1000 false chr06: 20327375-20328374 Salix purpurea
SapurV1A.0319s0010 2.0kb upstream 2.0kb upstream 3242 true chr06: 20328375-20331616 Salix purpurea
SapurV1A.0319s0010 2.0kb upstream 2.0kb upstream 2000 false chr06: 20329617-20331616 Salix purpurea
SapurV1A.0319s0010 2.0kb downstream 2.0kb downstream 3242 true chr06: 20326375-20329616 Salix purpurea
SapurV1A.0319s0010 2.0kb downstream 2.0kb downstream 2000 false chr06: 20326375-20328374 Salix purpurea
SapurV1A.0319s0010 5.0kb upstream 5.0kb upstream 6242 true chr06: 20328375-20334616 Salix purpurea
SapurV1A.0319s0010 5.0kb upstream 5.0kb upstream 5000 false chr06: 20329617-20334616 Salix purpurea
SapurV1A.0319s0010 5.0kb downstream 5.0kb downstream 6242 true chr06: 20323375-20329616 Salix purpurea
SapurV1A.0319s0010 5.0kb downstream 5.0kb downstream 5000 false chr06: 20323375-20328374 Salix purpurea
SapurV1A.0319s0010 10.0kb upstream 10.0kb upstream 11242 true chr06: 20328375-20339616 Salix purpurea
SapurV1A.0319s0010 10.0kb upstream 10.0kb upstream 10000 false chr06: 20329617-20339616 Salix purpurea
SapurV1A.0319s0010 10.0kb downstream 10.0kb downstream 11242 true chr06: 20318375-20329616 Salix purpurea
SapurV1A.0319s0010 10.0kb downstream 10.0kb downstream 10000 false chr06: 20318375-20328374 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458557 5262 Malpighiales View MSA
124240092 5268 Malvidae View MSA
124068371 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain