Gene : SapurV1A.0341s0110 S. purpurea v1.0
Defline:  (1 of 5) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) Genomic Order:  1386
Name:  ? SapurV1A.0341s0110 Secondary Identifier:  ? PAC:31411995
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0341s0110 0.5kb upstream 0.5kb upstream 4946 true chr06: 15614602-15619547 Salix purpurea
SapurV1A.0341s0110 0.5kb upstream 0.5kb upstream 500 false chr06: 15614602-15615101 Salix purpurea
SapurV1A.0341s0110 0.5kb downstream 0.5kb downstream 4946 true chr06: 15615102-15620047 Salix purpurea
SapurV1A.0341s0110 0.5kb downstream 0.5kb downstream 500 false chr06: 15619548-15620047 Salix purpurea
SapurV1A.0341s0110 1.0kb upstream 1.0kb upstream 5446 true chr06: 15614102-15619547 Salix purpurea
SapurV1A.0341s0110 1.0kb upstream 1.0kb upstream 1000 false chr06: 15614102-15615101 Salix purpurea
SapurV1A.0341s0110 1.0kb downstream 1.0kb downstream 5446 true chr06: 15615102-15620547 Salix purpurea
SapurV1A.0341s0110 1.0kb downstream 1.0kb downstream 1000 false chr06: 15619548-15620547 Salix purpurea
SapurV1A.0341s0110 2.0kb upstream 2.0kb upstream 6446 true chr06: 15613102-15619547 Salix purpurea
SapurV1A.0341s0110 2.0kb upstream 2.0kb upstream 2000 false chr06: 15613102-15615101 Salix purpurea
SapurV1A.0341s0110 2.0kb downstream 2.0kb downstream 6446 true chr06: 15615102-15621547 Salix purpurea
SapurV1A.0341s0110 2.0kb downstream 2.0kb downstream 2000 false chr06: 15619548-15621547 Salix purpurea
SapurV1A.0341s0110 5.0kb upstream 5.0kb upstream 9446 true chr06: 15610102-15619547 Salix purpurea
SapurV1A.0341s0110 5.0kb upstream 5.0kb upstream 5000 false chr06: 15610102-15615101 Salix purpurea
SapurV1A.0341s0110 5.0kb downstream 5.0kb downstream 9446 true chr06: 15615102-15624547 Salix purpurea
SapurV1A.0341s0110 5.0kb downstream 5.0kb downstream 5000 false chr06: 15619548-15624547 Salix purpurea
SapurV1A.0341s0110 10.0kb upstream 10.0kb upstream 14446 true chr06: 15605102-15619547 Salix purpurea
SapurV1A.0341s0110 10.0kb upstream 10.0kb upstream 10000 false chr06: 15605102-15615101 Salix purpurea
SapurV1A.0341s0110 10.0kb downstream 10.0kb downstream 14446 true chr06: 15615102-15629547 Salix purpurea
SapurV1A.0341s0110 10.0kb downstream 10.0kb downstream 10000 false chr06: 15619548-15629547 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459103 5262 Malpighiales View MSA
124238988 5268 Malvidae View MSA
124065938 5270 Rosid View MSA
123738887 5271 Pentapetalae View MSA
122785902 5272 Eudicot View MSA
122051295 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121349652 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain