Gene : SapurV1A.1207s0020 S. purpurea v1.0
Defline:  (1 of 8) K00600 - glycine hydroxymethyltransferase (glyA, SHMT) Genomic Order:  1827
Name:  ? SapurV1A.1207s0020 Secondary Identifier:  ? PAC:31411913
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea GLYSYN-PWY Salix purpurea pathologic  
Spurpurea PWY-2161 Salix purpurea pathologic  
Spurpurea PWY-3841 Salix purpurea pathologic  
Spurpurea SER-GLYSYN-PWY Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1207s0020 0.5kb upstream 0.5kb upstream 6324 true chr06: 22430888-22437211 Salix purpurea
SapurV1A.1207s0020 0.5kb upstream 0.5kb upstream 500 false chr06: 22436712-22437211 Salix purpurea
SapurV1A.1207s0020 0.5kb downstream 0.5kb downstream 6324 true chr06: 22430388-22436711 Salix purpurea
SapurV1A.1207s0020 0.5kb downstream 0.5kb downstream 500 false chr06: 22430388-22430887 Salix purpurea
SapurV1A.1207s0020 1.0kb upstream 1.0kb upstream 6824 true chr06: 22430888-22437711 Salix purpurea
SapurV1A.1207s0020 1.0kb upstream 1.0kb upstream 1000 false chr06: 22436712-22437711 Salix purpurea
SapurV1A.1207s0020 1.0kb downstream 1.0kb downstream 6824 true chr06: 22429888-22436711 Salix purpurea
SapurV1A.1207s0020 1.0kb downstream 1.0kb downstream 1000 false chr06: 22429888-22430887 Salix purpurea
SapurV1A.1207s0020 2.0kb upstream 2.0kb upstream 7824 true chr06: 22430888-22438711 Salix purpurea
SapurV1A.1207s0020 2.0kb upstream 2.0kb upstream 2000 false chr06: 22436712-22438711 Salix purpurea
SapurV1A.1207s0020 2.0kb downstream 2.0kb downstream 7824 true chr06: 22428888-22436711 Salix purpurea
SapurV1A.1207s0020 2.0kb downstream 2.0kb downstream 2000 false chr06: 22428888-22430887 Salix purpurea
SapurV1A.1207s0020 5.0kb upstream 5.0kb upstream 10824 true chr06: 22430888-22441711 Salix purpurea
SapurV1A.1207s0020 5.0kb upstream 5.0kb upstream 5000 false chr06: 22436712-22441711 Salix purpurea
SapurV1A.1207s0020 5.0kb downstream 5.0kb downstream 10824 true chr06: 22425888-22436711 Salix purpurea
SapurV1A.1207s0020 5.0kb downstream 5.0kb downstream 5000 false chr06: 22425888-22430887 Salix purpurea
SapurV1A.1207s0020 10.0kb upstream 10.0kb upstream 15824 true chr06: 22430888-22446711 Salix purpurea
SapurV1A.1207s0020 10.0kb upstream 10.0kb upstream 10000 false chr06: 22436712-22446711 Salix purpurea
SapurV1A.1207s0020 10.0kb downstream 10.0kb downstream 15824 true chr06: 22420888-22436711 Salix purpurea
SapurV1A.1207s0020 10.0kb downstream 10.0kb downstream 10000 false chr06: 22420888-22430887 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791751 5273 Angiosperm View MSA
122450306 5262 Malpighiales View MSA
124253423 5268 Malvidae View MSA
124062282 5270 Rosid View MSA
123744611 5271 Pentapetalae View MSA
122789540 5272 Eudicot View MSA
121345595 5274 Embryophyte View MSA
123425169 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain