Gene : SapurV1A.1377s0060 S. purpurea v1.0

Defline:  (1 of 1) PTHR23240//PTHR23240:SF11 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED // SUBFAMILY NOT NAMED Genomic Order:  923
Name:  ? SapurV1A.1377s0060 Secondary Identifier:  ? PAC:31451929

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1377s0060 0.5kb upstream 0.5kb upstream 3908 true chr07: 12488716-12492623 Salix purpurea
SapurV1A.1377s0060 0.5kb upstream 0.5kb upstream 500 false chr07: 12492124-12492623 Salix purpurea
SapurV1A.1377s0060 0.5kb downstream 0.5kb downstream 3908 true chr07: 12488216-12492123 Salix purpurea
SapurV1A.1377s0060 0.5kb downstream 0.5kb downstream 500 false chr07: 12488216-12488715 Salix purpurea
SapurV1A.1377s0060 1.0kb upstream 1.0kb upstream 4408 true chr07: 12488716-12493123 Salix purpurea
SapurV1A.1377s0060 1.0kb upstream 1.0kb upstream 1000 false chr07: 12492124-12493123 Salix purpurea
SapurV1A.1377s0060 1.0kb downstream 1.0kb downstream 4408 true chr07: 12487716-12492123 Salix purpurea
SapurV1A.1377s0060 1.0kb downstream 1.0kb downstream 1000 false chr07: 12487716-12488715 Salix purpurea
SapurV1A.1377s0060 2.0kb upstream 2.0kb upstream 5408 true chr07: 12488716-12494123 Salix purpurea
SapurV1A.1377s0060 2.0kb upstream 2.0kb upstream 2000 false chr07: 12492124-12494123 Salix purpurea
SapurV1A.1377s0060 2.0kb downstream 2.0kb downstream 5408 true chr07: 12486716-12492123 Salix purpurea
SapurV1A.1377s0060 2.0kb downstream 2.0kb downstream 2000 false chr07: 12486716-12488715 Salix purpurea
SapurV1A.1377s0060 5.0kb upstream 5.0kb upstream 8408 true chr07: 12488716-12497123 Salix purpurea
SapurV1A.1377s0060 5.0kb upstream 5.0kb upstream 5000 false chr07: 12492124-12497123 Salix purpurea
SapurV1A.1377s0060 5.0kb downstream 5.0kb downstream 8408 true chr07: 12483716-12492123 Salix purpurea
SapurV1A.1377s0060 5.0kb downstream 5.0kb downstream 5000 false chr07: 12483716-12488715 Salix purpurea
SapurV1A.1377s0060 10.0kb upstream 10.0kb upstream 13408 true chr07: 12488716-12502123 Salix purpurea
SapurV1A.1377s0060 10.0kb upstream 10.0kb upstream 10000 false chr07: 12492124-12502123 Salix purpurea
SapurV1A.1377s0060 10.0kb downstream 10.0kb downstream 13408 true chr07: 12478716-12492123 Salix purpurea
SapurV1A.1377s0060 10.0kb downstream 10.0kb downstream 10000 false chr07: 12478716-12488715 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122409754 5262 Malpighiales Singleton cluster - no MSA
124204927 5268 Malvidae Singleton cluster - no MSA
123924147 5270 Rosid Singleton cluster - no MSA
123504270 5271 Pentapetalae Singleton cluster - no MSA
122539383 5272 Eudicot Singleton cluster - no MSA
122043083 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain