Gene : SapurV1A.0164s0250 S. purpurea v1.0
Defline:  (1 of 3) PTHR31642//PTHR31642:SF40 - FAMILY NOT NAMED // DUAL TRANSCRIPTION UNIT AND ALTERNATIVE SPLICING PROTEIN GLAUCE Genomic Order:  690
Name:  ? SapurV1A.0164s0250 Secondary Identifier:  ? PAC:31417971
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-7120 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0164s0250 0.5kb upstream 0.5kb upstream 3740 true chr08: 5380328-5384067 Salix purpurea
SapurV1A.0164s0250 0.5kb upstream 0.5kb upstream 500 false chr08: 5380328-5380827 Salix purpurea
SapurV1A.0164s0250 0.5kb downstream 0.5kb downstream 3740 true chr08: 5380828-5384567 Salix purpurea
SapurV1A.0164s0250 0.5kb downstream 0.5kb downstream 500 false chr08: 5384068-5384567 Salix purpurea
SapurV1A.0164s0250 1.0kb upstream 1.0kb upstream 4240 true chr08: 5379828-5384067 Salix purpurea
SapurV1A.0164s0250 1.0kb upstream 1.0kb upstream 1000 false chr08: 5379828-5380827 Salix purpurea
SapurV1A.0164s0250 1.0kb downstream 1.0kb downstream 4240 true chr08: 5380828-5385067 Salix purpurea
SapurV1A.0164s0250 1.0kb downstream 1.0kb downstream 1000 false chr08: 5384068-5385067 Salix purpurea
SapurV1A.0164s0250 2.0kb upstream 2.0kb upstream 5240 true chr08: 5378828-5384067 Salix purpurea
SapurV1A.0164s0250 2.0kb upstream 2.0kb upstream 2000 false chr08: 5378828-5380827 Salix purpurea
SapurV1A.0164s0250 2.0kb downstream 2.0kb downstream 5240 true chr08: 5380828-5386067 Salix purpurea
SapurV1A.0164s0250 2.0kb downstream 2.0kb downstream 2000 false chr08: 5384068-5386067 Salix purpurea
SapurV1A.0164s0250 5.0kb upstream 5.0kb upstream 8240 true chr08: 5375828-5384067 Salix purpurea
SapurV1A.0164s0250 5.0kb upstream 5.0kb upstream 5000 false chr08: 5375828-5380827 Salix purpurea
SapurV1A.0164s0250 5.0kb downstream 5.0kb downstream 8240 true chr08: 5380828-5389067 Salix purpurea
SapurV1A.0164s0250 5.0kb downstream 5.0kb downstream 5000 false chr08: 5384068-5389067 Salix purpurea
SapurV1A.0164s0250 10.0kb upstream 10.0kb upstream 13240 true chr08: 5370828-5384067 Salix purpurea
SapurV1A.0164s0250 10.0kb upstream 10.0kb upstream 10000 false chr08: 5370828-5380827 Salix purpurea
SapurV1A.0164s0250 10.0kb downstream 10.0kb downstream 13240 true chr08: 5380828-5394067 Salix purpurea
SapurV1A.0164s0250 10.0kb downstream 10.0kb downstream 10000 false chr08: 5384068-5394067 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457469 5262 Malpighiales View MSA
124243245 5268 Malvidae View MSA
124063642 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain