Gene : SapurV1A.4689s0010 S. purpurea v1.0
Defline:  (1 of 4) K00025 - malate dehydrogenase (MDH1) Genomic Order:  1443
Name:  ? SapurV1A.4689s0010 Secondary Identifier:  ? PAC:31417559
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea GLUCONEO-PWY Salix purpurea pathologic  
Spurpurea GLYOXYLATE-BYPASS Salix purpurea pathologic  
Spurpurea PWY-5464 Salix purpurea pathologic  
Spurpurea PWY-561 Salix purpurea pathologic  
Spurpurea PWY-5690 Salix purpurea pathologic  
Spurpurea PWY66-399 Salix purpurea pathologic  
Spurpurea PWY-7115 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.4689s0010 0.5kb upstream 0.5kb upstream 4433 true chr08: 11926477-11930909 Salix purpurea
SapurV1A.4689s0010 0.5kb upstream 0.5kb upstream 500 false chr08: 11930410-11930909 Salix purpurea
SapurV1A.4689s0010 0.5kb downstream 0.5kb downstream 4433 true chr08: 11925977-11930409 Salix purpurea
SapurV1A.4689s0010 0.5kb downstream 0.5kb downstream 500 false chr08: 11925977-11926476 Salix purpurea
SapurV1A.4689s0010 1.0kb upstream 1.0kb upstream 4933 true chr08: 11926477-11931409 Salix purpurea
SapurV1A.4689s0010 1.0kb upstream 1.0kb upstream 1000 false chr08: 11930410-11931409 Salix purpurea
SapurV1A.4689s0010 1.0kb downstream 1.0kb downstream 4933 true chr08: 11925477-11930409 Salix purpurea
SapurV1A.4689s0010 1.0kb downstream 1.0kb downstream 1000 false chr08: 11925477-11926476 Salix purpurea
SapurV1A.4689s0010 2.0kb upstream 2.0kb upstream 5933 true chr08: 11926477-11932409 Salix purpurea
SapurV1A.4689s0010 2.0kb upstream 2.0kb upstream 2000 false chr08: 11930410-11932409 Salix purpurea
SapurV1A.4689s0010 2.0kb downstream 2.0kb downstream 5933 true chr08: 11924477-11930409 Salix purpurea
SapurV1A.4689s0010 2.0kb downstream 2.0kb downstream 2000 false chr08: 11924477-11926476 Salix purpurea
SapurV1A.4689s0010 5.0kb upstream 5.0kb upstream 8933 true chr08: 11926477-11935409 Salix purpurea
SapurV1A.4689s0010 5.0kb upstream 5.0kb upstream 5000 false chr08: 11930410-11935409 Salix purpurea
SapurV1A.4689s0010 5.0kb downstream 5.0kb downstream 8933 true chr08: 11921477-11930409 Salix purpurea
SapurV1A.4689s0010 5.0kb downstream 5.0kb downstream 5000 false chr08: 11921477-11926476 Salix purpurea
SapurV1A.4689s0010 10.0kb upstream 10.0kb upstream 13933 true chr08: 11926477-11940409 Salix purpurea
SapurV1A.4689s0010 10.0kb upstream 10.0kb upstream 10000 false chr08: 11930410-11940409 Salix purpurea
SapurV1A.4689s0010 10.0kb downstream 10.0kb downstream 13933 true chr08: 11916477-11930409 Salix purpurea
SapurV1A.4689s0010 10.0kb downstream 10.0kb downstream 10000 false chr08: 11916477-11926476 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122406493 5262 Malpighiales Singleton cluster - no MSA
124244988 5268 Malvidae View MSA
124064013 5270 Rosid View MSA
123739138 5271 Pentapetalae View MSA
122789281 5272 Eudicot View MSA
122050336 5273 Angiosperm View MSA
121345674 5274 Embryophyte View MSA
123426378 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain