Gene : SapurV1A.0005s0870 S. purpurea v1.0
Defline:  (1 of 4) K00058 - D-3-phosphoglycerate dehydrogenase (serA, PHGDH) Genomic Order:  1491
Name:  ? SapurV1A.0005s0870 Secondary Identifier:  ? PAC:31436118
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea SER-GLYSYN-PWY Salix purpurea pathologic  
Spurpurea SERSYN-PWY Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0005s0870 0.5kb upstream 0.5kb upstream 3957 true chr16: 17651776-17655732 Salix purpurea
SapurV1A.0005s0870 0.5kb upstream 0.5kb upstream 500 false chr16: 17651776-17652275 Salix purpurea
SapurV1A.0005s0870 0.5kb downstream 0.5kb downstream 3957 true chr16: 17652276-17656232 Salix purpurea
SapurV1A.0005s0870 0.5kb downstream 0.5kb downstream 500 false chr16: 17655733-17656232 Salix purpurea
SapurV1A.0005s0870 1.0kb upstream 1.0kb upstream 4457 true chr16: 17651276-17655732 Salix purpurea
SapurV1A.0005s0870 1.0kb upstream 1.0kb upstream 1000 false chr16: 17651276-17652275 Salix purpurea
SapurV1A.0005s0870 1.0kb downstream 1.0kb downstream 4457 true chr16: 17652276-17656732 Salix purpurea
SapurV1A.0005s0870 1.0kb downstream 1.0kb downstream 1000 false chr16: 17655733-17656732 Salix purpurea
SapurV1A.0005s0870 2.0kb upstream 2.0kb upstream 5457 true chr16: 17650276-17655732 Salix purpurea
SapurV1A.0005s0870 2.0kb upstream 2.0kb upstream 2000 false chr16: 17650276-17652275 Salix purpurea
SapurV1A.0005s0870 2.0kb downstream 2.0kb downstream 5457 true chr16: 17652276-17657732 Salix purpurea
SapurV1A.0005s0870 2.0kb downstream 2.0kb downstream 2000 false chr16: 17655733-17657732 Salix purpurea
SapurV1A.0005s0870 5.0kb upstream 5.0kb upstream 8457 true chr16: 17647276-17655732 Salix purpurea
SapurV1A.0005s0870 5.0kb upstream 5.0kb upstream 5000 false chr16: 17647276-17652275 Salix purpurea
SapurV1A.0005s0870 5.0kb downstream 5.0kb downstream 8457 true chr16: 17652276-17660732 Salix purpurea
SapurV1A.0005s0870 5.0kb downstream 5.0kb downstream 5000 false chr16: 17655733-17660732 Salix purpurea
SapurV1A.0005s0870 10.0kb upstream 10.0kb upstream 13457 true chr16: 17642276-17655732 Salix purpurea
SapurV1A.0005s0870 10.0kb upstream 10.0kb upstream 10000 false chr16: 17642276-17652275 Salix purpurea
SapurV1A.0005s0870 10.0kb downstream 10.0kb downstream 13457 true chr16: 17652276-17665732 Salix purpurea
SapurV1A.0005s0870 10.0kb downstream 10.0kb downstream 10000 false chr16: 17655733-17665732 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122425869 5262 Malpighiales View MSA
124245424 5268 Malvidae View MSA
124071894 5270 Rosid View MSA
123750282 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain