Gene : SapurV1A.0555s0040 S. purpurea v1.0
Defline:  (1 of 1) KOG0106//KOG0110//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) Genomic Order:  1183
Name:  ? SapurV1A.0555s0040 Secondary Identifier:  ? PAC:31420466
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0555s0040 0.5kb upstream 0.5kb upstream 3929 true chr01: 10163427-10167355 Salix purpurea
SapurV1A.0555s0040 0.5kb upstream 0.5kb upstream 500 false chr01: 10166856-10167355 Salix purpurea
SapurV1A.0555s0040 0.5kb downstream 0.5kb downstream 3929 true chr01: 10162927-10166855 Salix purpurea
SapurV1A.0555s0040 0.5kb downstream 0.5kb downstream 500 false chr01: 10162927-10163426 Salix purpurea
SapurV1A.0555s0040 1.0kb upstream 1.0kb upstream 4429 true chr01: 10163427-10167855 Salix purpurea
SapurV1A.0555s0040 1.0kb upstream 1.0kb upstream 1000 false chr01: 10166856-10167855 Salix purpurea
SapurV1A.0555s0040 1.0kb downstream 1.0kb downstream 4429 true chr01: 10162427-10166855 Salix purpurea
SapurV1A.0555s0040 1.0kb downstream 1.0kb downstream 1000 false chr01: 10162427-10163426 Salix purpurea
SapurV1A.0555s0040 2.0kb upstream 2.0kb upstream 5429 true chr01: 10163427-10168855 Salix purpurea
SapurV1A.0555s0040 2.0kb upstream 2.0kb upstream 2000 false chr01: 10166856-10168855 Salix purpurea
SapurV1A.0555s0040 2.0kb downstream 2.0kb downstream 5429 true chr01: 10161427-10166855 Salix purpurea
SapurV1A.0555s0040 2.0kb downstream 2.0kb downstream 2000 false chr01: 10161427-10163426 Salix purpurea
SapurV1A.0555s0040 5.0kb upstream 5.0kb upstream 8429 true chr01: 10163427-10171855 Salix purpurea
SapurV1A.0555s0040 5.0kb upstream 5.0kb upstream 5000 false chr01: 10166856-10171855 Salix purpurea
SapurV1A.0555s0040 5.0kb downstream 5.0kb downstream 8429 true chr01: 10158427-10166855 Salix purpurea
SapurV1A.0555s0040 5.0kb downstream 5.0kb downstream 5000 false chr01: 10158427-10163426 Salix purpurea
SapurV1A.0555s0040 10.0kb upstream 10.0kb upstream 13429 true chr01: 10163427-10176855 Salix purpurea
SapurV1A.0555s0040 10.0kb upstream 10.0kb upstream 10000 false chr01: 10166856-10176855 Salix purpurea
SapurV1A.0555s0040 10.0kb downstream 10.0kb downstream 13429 true chr01: 10153427-10166855 Salix purpurea
SapurV1A.0555s0040 10.0kb downstream 10.0kb downstream 10000 false chr01: 10153427-10163426 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456317 5262 Malpighiales View MSA
124243324 5268 Malvidae View MSA
124064961 5270 Rosid View MSA
123740281 5271 Pentapetalae View MSA
122787743 5272 Eudicot View MSA
122043874 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310205 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain