Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 122043874

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  66

66 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30054.t000036 (1 of 1) KOG0110 - RNA-binding protein (RRM superfamily) R. communis v0.1 2659   30054: 228051-230709
Cucsa.321920 (1 of 3) PTHR24012:SF477 - PROTEIN RBD-1 C. sativus v1.0 2305   scaffold03080: 1756410-1758714
orange1.1g044184m.g (1 of 1) KOG0106//KOG0131//KOG0144//KOG0145 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ELAV/HU (RRM superfamily) C. sinensis v1.1 3314   scaffold02139: 4518-7831
AT2G35410 (1 of 1) KOG0105//KOG0106//KOG0110//KOG0130//KOG0131 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // RNA-binding protein RBM8/Tsunagi (RRM superfamily) // Splicing factor 3b, subunit 4 A. thaliana TAIR10 1427   Chr2: 14898324-14899750
Thhalv10016986m.g (1 of 1) KOG0110 - RNA-binding protein (RRM superfamily) E. salsugineum v1.0 1459   scaffold_10: 8179149-8180607
Ciclev10012439m.g (1 of 1) KOG0106//KOG0131//KOG0144//KOG0145 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ELAV/HU (RRM superfamily) C. clementina v1.0 5116   scaffold_6: 3344345-3349460
Lus10037265.g (1 of 1) KOG0106//KOG0131//KOG0146 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) L. usitatissimum v1.0 1594   scaffold462: 1047120-1048713
Lus10035678.g (1 of 1) KOG0106//KOG0131//KOG0144//KOG0146 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ETR-3 (RRM superfamily) L. usitatissimum v1.0 1584   scaffold464: 876880-878463
Gorai.007G032500 (1 of 32) KOG0131 - Splicing factor 3b, subunit 4 G. raimondii v2.1 2130   Chr07: 2234253-2236382
Thecc1EG015696 (1 of 1) KOG0105//KOG0106//KOG0131//KOG0144//KOG0146 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ETR-3 (RRM superfamily) T. cacao v1.1 2734   scaffold_3: 29165696-29168429
Migut.A01012 (1 of 1) KOG0106//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) M. guttatus v2.0 2053   scaffold_1: 7227195-7229247
Araha.12162s0003 (1 of 1) KOG0110 - RNA-binding protein (RRM superfamily) A. halleri v1.1 1412   Scaffold12162: 3527-4938
Cagra.0993s0049 (1 of 1) KOG0110 - RNA-binding protein (RRM superfamily) C. grandiflora v1.1 1620   Scaffold993: 161916-163535
Glyma.09G205500 (1 of 1) KOG0105//KOG0106//KOG0131//KOG0144 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) G. max Wm82.a2.v1 4256   Chr09: 42958714-42962969
Glyma.01G017400 (1 of 1) KOG0106//KOG0110//KOG0131//KOG0144//KOG0146 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ETR-3 (RRM superfamily) G. max Wm82.a2.v1 3463   Chr01: 1653678-1657140
Brara.D02139 (1 of 3) PTHR24012:SF477 - PROTEIN RBD-1 B. rapa FPsc v1.3 1391   A04: 17473877-17475267
Bostr.23794s0562 (1 of 1) KOG0110 - RNA-binding protein (RRM superfamily) B. stricta v1.2 1474   Scaffold23794: 3214891-3216364
Medtr5g030020 (1 of 1) KOG0106//KOG0110//KOG0131 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 M. truncatula Mt4.0v1 5462   chr5: 12622359-12627820
SapurV1A.0555s0040 (1 of 1) KOG0106//KOG0110//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) S. purpurea v1.0 3429   chr01: 10163427-10166855
evm_27.TU.AmTr_v1.0_scaffold00002.183 (1 of 1) KOG0106//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) A. trichopoda v1.0 3243   AmTr_v1.0_scaffold00002: 3604806-3608048
Eucgr.D02207 (1 of 1) KOG0105//KOG0106//KOG0110//KOG0131 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 E. grandis v2.0 2713   Chr04: 35659455-35662167
Prupe.5G034000 (1 of 1) KOG0106//KOG0110//KOG0131 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 P. persica v2.1 3742   Pp05: 3867914-3871655
GSMUA_Achr11G23360_001 (1 of 1) KOG0105//KOG0106//KOG0110//KOG0131//KOG0533 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RRM motif-containing protein M. acuminata v1 6068   chr11: 23257493-23263560
Manes.17G010200 (1 of 1) KOG0106//KOG0110//KOG0114//KOG0131 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 M. esculenta v6.1 3232   Chromosome17: 2649716-2652947
Kalax.1137s0002 (1 of 2) KOG0106//KOG0110//KOG0130//KOG0131//KOG0144//KOG0145 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // RNA-binding protein RBM8/Tsunagi (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ELAV/HU (RRM superfamily) K. laxiflora v1.1 4611   scaffold_1137: 25007-29617
Kalax.0032s0103 (1 of 7) PTHR24012:SF477 - PROTEIN RBD-1 K. laxiflora v1.1 2707   scaffold_32: 829066-831772
Kalax.0695s0003 (1 of 2) KOG0106//KOG0110//KOG0130//KOG0131//KOG0144//KOG0145 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // RNA-binding protein RBM8/Tsunagi (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ELAV/HU (RRM superfamily) K. laxiflora v1.1 4053   scaffold_695: 39710-43762
Seita.7G218700 (1 of 13) PF00076//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) S. italica v2.2 2518   scaffold_7: 28657399-28659916
Bradi5g19970 (1 of 1) KOG0105//KOG0106//KOG0131 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 B. distachyon v3.1 2555   Bd5: 23042178-23044732
Aqcoe3G224200 (1 of 1) KOG0105//KOG0106//KOG0130//KOG0131//KOG0144 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein RBM8/Tsunagi (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) A. coerulea v3.1 16173   Chr_03: 26419343-26435515

66 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.321920.1 C. sativus v1.0 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
orange1.1g044184m C. sinensis v1.1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Thhalv10016986m E. salsugineum v1.0 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Ciclev10012439m C. clementina v1.0 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Gorai.007G032500.1 G. raimondii v2.1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Cagra.0993s0049.1.p C. grandiflora v1.1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Medtr5g030020.1 M. truncatula Mt4.0v1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00002.183 A. trichopoda v1.0 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Prupe.5G034000.1.p P. persica v2.1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
GSMUA_Achr11P23360_001 M. acuminata v1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Kalax.1137s0002.1.p K. laxiflora v1.1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5273 Angiosperm
Kalax.0032s0103.1.p K. laxiflora v1.1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5273 Angiosperm
Kalax.0695s0003.1.p K. laxiflora v1.1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5273 Angiosperm
Seita.7G218700.1.p S. italica v2.2 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Bradi5g19970.1.p B. distachyon v3.1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Brast09G189100.1.p B. stacei v1.1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Aqcoe3G224200.1.p A. coerulea v3.1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
LOC_Os04g50110.1 O. sativa v7.0 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Zosma29g01270.1 Z. marina v2.2 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Kaladp0808s0005.1.p K. fedtschenkoi v1.1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5273 Angiosperm
DCAR_004294 D. carota v2.0 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5273 Angiosperm
AUR62007302-RA C. quinoa v1.0 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Zm00008a006430_P01 Z. mays PH207 v1.1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
PGSC0003DMP400030598 S. tuberosum v4.03 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Pavir.7KG323500.1.p P. virgatum v4.1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5273 Angiosperm
Sobic.006G197700.1.p S. bicolor v3.1.1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
HORVU2Hr1G105930.2 H. vulgare r1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
MD06G1035700 M. domestica v1.1 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Zm00001d002490_P001 Z. mays RefGen_V4 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
HanXRQChr13g0395131 H. annuus r1.2 122043874 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5273 Angiosperm