Gene : Migut.A01012 M. guttatus v2.0

Defline:  (1 of 1) KOG0106//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) Genomic Order:  1012
Name:  ? Migut.A01012 Secondary Identifier:  ? PAC:28939168

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Migut.A01012 0.5kb upstream 0.5kb upstream 2553 true scaffold_1: 7226695-7229247 Mimulus guttatus
Migut.A01012 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7226695-7227194 Mimulus guttatus
Migut.A01012 0.5kb downstream 0.5kb downstream 2553 true scaffold_1: 7227195-7229747 Mimulus guttatus
Migut.A01012 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7229248-7229747 Mimulus guttatus
Migut.A01012 1.0kb upstream 1.0kb upstream 3053 true scaffold_1: 7226195-7229247 Mimulus guttatus
Migut.A01012 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7226195-7227194 Mimulus guttatus
Migut.A01012 1.0kb downstream 1.0kb downstream 3053 true scaffold_1: 7227195-7230247 Mimulus guttatus
Migut.A01012 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7229248-7230247 Mimulus guttatus
Migut.A01012 2.0kb upstream 2.0kb upstream 4053 true scaffold_1: 7225195-7229247 Mimulus guttatus
Migut.A01012 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7225195-7227194 Mimulus guttatus
Migut.A01012 2.0kb downstream 2.0kb downstream 4053 true scaffold_1: 7227195-7231247 Mimulus guttatus
Migut.A01012 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7229248-7231247 Mimulus guttatus
Migut.A01012 5.0kb upstream 5.0kb upstream 7053 true scaffold_1: 7222195-7229247 Mimulus guttatus
Migut.A01012 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7222195-7227194 Mimulus guttatus
Migut.A01012 5.0kb downstream 5.0kb downstream 7053 true scaffold_1: 7227195-7234247 Mimulus guttatus
Migut.A01012 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7229248-7234247 Mimulus guttatus
Migut.A01012 10.0kb upstream 10.0kb upstream 12053 true scaffold_1: 7217195-7229247 Mimulus guttatus
Migut.A01012 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7217195-7227194 Mimulus guttatus
Migut.A01012 10.0kb downstream 10.0kb downstream 12053 true scaffold_1: 7227195-7239247 Mimulus guttatus
Migut.A01012 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7229248-7239247 Mimulus guttatus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466297 5263 Asterids View MSA
123740281 5271 Pentapetalae View MSA
122787743 5272 Eudicot View MSA
122043874 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310205 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain