Gene : evm_27.TU.AmTr_v1.0_scaffold00002.183 A. trichopoda v1.0
Defline:  (1 of 1) KOG0106//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) Genomic Order:  183
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.183 Secondary Identifier:  ? PAC:31562400
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.183 0.5kb upstream 0.5kb upstream 3743 true AmTr_v1.0_scaffold00002: 3604306-3608048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 3604306-3604805 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 0.5kb downstream 0.5kb downstream 3743 true AmTr_v1.0_scaffold00002: 3604806-3608548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 3608049-3608548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 1.0kb upstream 1.0kb upstream 4243 true AmTr_v1.0_scaffold00002: 3603806-3608048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 3603806-3604805 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 1.0kb downstream 1.0kb downstream 4243 true AmTr_v1.0_scaffold00002: 3604806-3609048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 3608049-3609048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 2.0kb upstream 2.0kb upstream 5243 true AmTr_v1.0_scaffold00002: 3602806-3608048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 3602806-3604805 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 2.0kb downstream 2.0kb downstream 5243 true AmTr_v1.0_scaffold00002: 3604806-3610048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 3608049-3610048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 5.0kb upstream 5.0kb upstream 8243 true AmTr_v1.0_scaffold00002: 3599806-3608048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 3599806-3604805 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 5.0kb downstream 5.0kb downstream 8243 true AmTr_v1.0_scaffold00002: 3604806-3613048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 3608049-3613048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 10.0kb upstream 10.0kb upstream 13243 true AmTr_v1.0_scaffold00002: 3594806-3608048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 3594806-3604805 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 10.0kb downstream 10.0kb downstream 13243 true AmTr_v1.0_scaffold00002: 3604806-3618048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.183 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 3608049-3618048 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043874 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310205 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain