Gene : Lus10035678.g L. usitatissimum v1.0

Defline:  (1 of 1) KOG0106//KOG0131//KOG0144//KOG0146 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ETR-3 (RRM superfamily) Genomic Order:  180
Name:  ? Lus10035678.g Secondary Identifier:  ? PAC:23147569

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10035678.g 0.5kb upstream 0.5kb upstream 2084 true scaffold464: 876880-878963 Linum usitatissimum
Lus10035678.g 0.5kb upstream 0.5kb upstream 500 false scaffold464: 878464-878963 Linum usitatissimum
Lus10035678.g 0.5kb downstream 0.5kb downstream 2084 true scaffold464: 876380-878463 Linum usitatissimum
Lus10035678.g 0.5kb downstream 0.5kb downstream 500 false scaffold464: 876380-876879 Linum usitatissimum
Lus10035678.g 1.0kb upstream 1.0kb upstream 2584 true scaffold464: 876880-879463 Linum usitatissimum
Lus10035678.g 1.0kb upstream 1.0kb upstream 1000 false scaffold464: 878464-879463 Linum usitatissimum
Lus10035678.g 1.0kb downstream 1.0kb downstream 2584 true scaffold464: 875880-878463 Linum usitatissimum
Lus10035678.g 1.0kb downstream 1.0kb downstream 1000 false scaffold464: 875880-876879 Linum usitatissimum
Lus10035678.g 2.0kb upstream 2.0kb upstream 3584 true scaffold464: 876880-880463 Linum usitatissimum
Lus10035678.g 2.0kb upstream 2.0kb upstream 2000 false scaffold464: 878464-880463 Linum usitatissimum
Lus10035678.g 2.0kb downstream 2.0kb downstream 3584 true scaffold464: 874880-878463 Linum usitatissimum
Lus10035678.g 2.0kb downstream 2.0kb downstream 2000 false scaffold464: 874880-876879 Linum usitatissimum
Lus10035678.g 5.0kb upstream 5.0kb upstream 6584 true scaffold464: 876880-883463 Linum usitatissimum
Lus10035678.g 5.0kb upstream 5.0kb upstream 5000 false scaffold464: 878464-883463 Linum usitatissimum
Lus10035678.g 5.0kb downstream 5.0kb downstream 6584 true scaffold464: 871880-878463 Linum usitatissimum
Lus10035678.g 5.0kb downstream 5.0kb downstream 5000 false scaffold464: 871880-876879 Linum usitatissimum
Lus10035678.g 10.0kb upstream 10.0kb upstream 11584 true scaffold464: 876880-888463 Linum usitatissimum
Lus10035678.g 10.0kb upstream 10.0kb upstream 10000 false scaffold464: 878464-888463 Linum usitatissimum
Lus10035678.g 10.0kb downstream 10.0kb downstream 11584 true scaffold464: 866880-878463 Linum usitatissimum
Lus10035678.g 10.0kb downstream 10.0kb downstream 10000 false scaffold464: 866880-876879 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456317 5262 Malpighiales View MSA
124243324 5268 Malvidae View MSA
124064961 5270 Rosid View MSA
123740281 5271 Pentapetalae View MSA
122787743 5272 Eudicot View MSA
122043874 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310205 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain