Gene : evm_27.TU.AmTr_v1.0_scaffold00001.194 A. trichopoda v1.0
Defline:  (1 of 2) PF04949 - Transcriptional activator (Transcrip_act) Genomic Order:  191
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00001.194 Secondary Identifier:  ? PAC:31551341
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00001.194 0.5kb upstream 0.5kb upstream 12643 true AmTr_v1.0_scaffold00001: 3475062-3487704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00001: 3475062-3475561 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 0.5kb downstream 0.5kb downstream 12643 true AmTr_v1.0_scaffold00001: 3475562-3488204 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00001: 3487705-3488204 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 1.0kb upstream 1.0kb upstream 13143 true AmTr_v1.0_scaffold00001: 3474562-3487704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00001: 3474562-3475561 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 1.0kb downstream 1.0kb downstream 13143 true AmTr_v1.0_scaffold00001: 3475562-3488704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00001: 3487705-3488704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 2.0kb upstream 2.0kb upstream 14143 true AmTr_v1.0_scaffold00001: 3473562-3487704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00001: 3473562-3475561 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 2.0kb downstream 2.0kb downstream 14143 true AmTr_v1.0_scaffold00001: 3475562-3489704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00001: 3487705-3489704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 5.0kb upstream 5.0kb upstream 17143 true AmTr_v1.0_scaffold00001: 3470562-3487704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00001: 3470562-3475561 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 5.0kb downstream 5.0kb downstream 17143 true AmTr_v1.0_scaffold00001: 3475562-3492704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00001: 3487705-3492704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 10.0kb upstream 10.0kb upstream 22143 true AmTr_v1.0_scaffold00001: 3465562-3487704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00001: 3465562-3475561 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 10.0kb downstream 10.0kb downstream 22143 true AmTr_v1.0_scaffold00001: 3475562-3497704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.194 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00001: 3487705-3497704 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047565 5273 Angiosperm View MSA
121345240 5274 Embryophyte View MSA
123426204 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain