Gene : evm_27.TU.AmTr_v1.0_scaffold00001.154 A. trichopoda v1.0
Defline:  (1 of 1) 4.1.1.17 - Ornithine decarboxylase / L-ornithine carboxy-lyase Genomic Order:  152
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00001.154 Secondary Identifier:  ? PAC:31551134
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda POLYAMINSYN3-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-46 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00001.154 0.5kb upstream 0.5kb upstream 1763 true AmTr_v1.0_scaffold00001: 2587554-2589316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00001: 2587554-2588053 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 0.5kb downstream 0.5kb downstream 1763 true AmTr_v1.0_scaffold00001: 2588054-2589816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00001: 2589317-2589816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 1.0kb upstream 1.0kb upstream 2263 true AmTr_v1.0_scaffold00001: 2587054-2589316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00001: 2587054-2588053 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 1.0kb downstream 1.0kb downstream 2263 true AmTr_v1.0_scaffold00001: 2588054-2590316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00001: 2589317-2590316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 2.0kb upstream 2.0kb upstream 3263 true AmTr_v1.0_scaffold00001: 2586054-2589316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00001: 2586054-2588053 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 2.0kb downstream 2.0kb downstream 3263 true AmTr_v1.0_scaffold00001: 2588054-2591316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00001: 2589317-2591316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 5.0kb upstream 5.0kb upstream 6263 true AmTr_v1.0_scaffold00001: 2583054-2589316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00001: 2583054-2588053 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 5.0kb downstream 5.0kb downstream 6263 true AmTr_v1.0_scaffold00001: 2588054-2594316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00001: 2589317-2594316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 10.0kb upstream 10.0kb upstream 11263 true AmTr_v1.0_scaffold00001: 2578054-2589316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00001: 2578054-2588053 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 10.0kb downstream 10.0kb downstream 11263 true AmTr_v1.0_scaffold00001: 2588054-2599316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.154 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00001: 2589317-2599316 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain