Gene : evm_27.TU.AmTr_v1.0_scaffold00001.144 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11079:SF73 - RNA PSEUDOURIDINE SYNTHASE 2, CHLOROPLASTIC Genomic Order:  143
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00001.144 Secondary Identifier:  ? PAC:31551501
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00001.144 0.5kb upstream 0.5kb upstream 17285 true AmTr_v1.0_scaffold00001: 2403271-2420555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00001: 2403271-2403770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 0.5kb downstream 0.5kb downstream 17285 true AmTr_v1.0_scaffold00001: 2403771-2421055 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00001: 2420556-2421055 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 1.0kb upstream 1.0kb upstream 17785 true AmTr_v1.0_scaffold00001: 2402771-2420555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00001: 2402771-2403770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 1.0kb downstream 1.0kb downstream 17785 true AmTr_v1.0_scaffold00001: 2403771-2421555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00001: 2420556-2421555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 2.0kb upstream 2.0kb upstream 18785 true AmTr_v1.0_scaffold00001: 2401771-2420555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00001: 2401771-2403770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 2.0kb downstream 2.0kb downstream 18785 true AmTr_v1.0_scaffold00001: 2403771-2422555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00001: 2420556-2422555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 5.0kb upstream 5.0kb upstream 21785 true AmTr_v1.0_scaffold00001: 2398771-2420555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00001: 2398771-2403770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 5.0kb downstream 5.0kb downstream 21785 true AmTr_v1.0_scaffold00001: 2403771-2425555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00001: 2420556-2425555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 10.0kb upstream 10.0kb upstream 26785 true AmTr_v1.0_scaffold00001: 2393771-2420555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00001: 2393771-2403770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 10.0kb downstream 10.0kb downstream 26785 true AmTr_v1.0_scaffold00001: 2403771-2430555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.144 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00001: 2420556-2430555 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047561 5273 Angiosperm View MSA
121344474 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

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