Gene : evm_27.TU.AmTr_v1.0_scaffold00001.137 A. trichopoda v1.0
Defline:  (1 of 1) PTHR19376:SF37 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 Genomic Order:  136
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00001.137 Secondary Identifier:  ? PAC:31550937
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00001.137 0.5kb upstream 0.5kb upstream 9160 true AmTr_v1.0_scaffold00001: 2287633-2296792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00001: 2287633-2288132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 0.5kb downstream 0.5kb downstream 9160 true AmTr_v1.0_scaffold00001: 2288133-2297292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00001: 2296793-2297292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 1.0kb upstream 1.0kb upstream 9660 true AmTr_v1.0_scaffold00001: 2287133-2296792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00001: 2287133-2288132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 1.0kb downstream 1.0kb downstream 9660 true AmTr_v1.0_scaffold00001: 2288133-2297792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00001: 2296793-2297792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 2.0kb upstream 2.0kb upstream 10660 true AmTr_v1.0_scaffold00001: 2286133-2296792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00001: 2286133-2288132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 2.0kb downstream 2.0kb downstream 10660 true AmTr_v1.0_scaffold00001: 2288133-2298792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00001: 2296793-2298792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 5.0kb upstream 5.0kb upstream 13660 true AmTr_v1.0_scaffold00001: 2283133-2296792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00001: 2283133-2288132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 5.0kb downstream 5.0kb downstream 13660 true AmTr_v1.0_scaffold00001: 2288133-2301792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00001: 2296793-2301792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 10.0kb upstream 10.0kb upstream 18660 true AmTr_v1.0_scaffold00001: 2278133-2296792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00001: 2278133-2288132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 10.0kb downstream 10.0kb downstream 18660 true AmTr_v1.0_scaffold00001: 2288133-2306792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00001.137 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00001: 2296793-2306792 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041040 5273 Angiosperm View MSA
121343935 5274 Embryophyte View MSA
123424077 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain