Gene : evm_27.TU.AmTr_v1.0_scaffold00002.360 A. trichopoda v1.0

Defline:  (1 of 1) PTHR28106:SF1 - MITOCHONDRIAL ATPASE COMPLEX SUBUNIT ATP10 Genomic Order:  359
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.360 Secondary Identifier:  ? PAC:31562794

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.360 0.5kb upstream 0.5kb upstream 10293 true AmTr_v1.0_scaffold00002: 6474021-6484313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 6474021-6474520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 0.5kb downstream 0.5kb downstream 10293 true AmTr_v1.0_scaffold00002: 6474521-6484813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 6484314-6484813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 1.0kb upstream 1.0kb upstream 10793 true AmTr_v1.0_scaffold00002: 6473521-6484313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 6473521-6474520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 1.0kb downstream 1.0kb downstream 10793 true AmTr_v1.0_scaffold00002: 6474521-6485313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 6484314-6485313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 2.0kb upstream 2.0kb upstream 11793 true AmTr_v1.0_scaffold00002: 6472521-6484313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 6472521-6474520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 2.0kb downstream 2.0kb downstream 11793 true AmTr_v1.0_scaffold00002: 6474521-6486313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 6484314-6486313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 5.0kb upstream 5.0kb upstream 14793 true AmTr_v1.0_scaffold00002: 6469521-6484313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 6469521-6474520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 5.0kb downstream 5.0kb downstream 14793 true AmTr_v1.0_scaffold00002: 6474521-6489313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 6484314-6489313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 10.0kb upstream 10.0kb upstream 19793 true AmTr_v1.0_scaffold00002: 6464521-6484313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 6464521-6474520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 10.0kb downstream 10.0kb downstream 19793 true AmTr_v1.0_scaffold00002: 6474521-6494313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.360 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 6484314-6494313 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045687 5273 Angiosperm View MSA
121346951 5274 Embryophyte View MSA
123424786 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain