Gene : evm_27.TU.AmTr_v1.0_scaffold00002.152 A. trichopoda v1.0
Defline:  (1 of 2) PTHR10150 - DNA REPAIR ENDONUCLEASE XPF Genomic Order:  152
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.152 Secondary Identifier:  ? PAC:31562762
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.152 0.5kb upstream 0.5kb upstream 15818 true AmTr_v1.0_scaffold00002: 2939748-2955565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 2939748-2940247 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 0.5kb downstream 0.5kb downstream 15818 true AmTr_v1.0_scaffold00002: 2940248-2956065 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 2955566-2956065 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 1.0kb upstream 1.0kb upstream 16318 true AmTr_v1.0_scaffold00002: 2939248-2955565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 2939248-2940247 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 1.0kb downstream 1.0kb downstream 16318 true AmTr_v1.0_scaffold00002: 2940248-2956565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 2955566-2956565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 2.0kb upstream 2.0kb upstream 17318 true AmTr_v1.0_scaffold00002: 2938248-2955565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 2938248-2940247 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 2.0kb downstream 2.0kb downstream 17318 true AmTr_v1.0_scaffold00002: 2940248-2957565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 2955566-2957565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 5.0kb upstream 5.0kb upstream 20318 true AmTr_v1.0_scaffold00002: 2935248-2955565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 2935248-2940247 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 5.0kb downstream 5.0kb downstream 20318 true AmTr_v1.0_scaffold00002: 2940248-2960565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 2955566-2960565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 10.0kb upstream 10.0kb upstream 25318 true AmTr_v1.0_scaffold00002: 2930248-2955565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 2930248-2940247 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 10.0kb downstream 10.0kb downstream 25318 true AmTr_v1.0_scaffold00002: 2940248-2965565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.152 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 2955566-2965565 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026556 5273 Angiosperm View MSA
121346199 5274 Embryophyte View MSA
123424869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain