Gene : evm_27.TU.AmTr_v1.0_scaffold00003.16 A. trichopoda v1.0
Defline:  (1 of 1) PTHR22912:SF165 - DIHYDROLIPOYL DEHYDROGENASE 1, CHLOROPLASTIC-RELATED Genomic Order:  15
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00003.16 Secondary Identifier:  ? PAC:31565463
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda GLYCLEAV-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-5046 Amborella trichopoda pathologic  
Atrichopoda PWY-5084 Amborella trichopoda pathologic  
Atrichopoda PWY-5173 Amborella trichopoda pathologic  
Atrichopoda PWY-5464 Amborella trichopoda pathologic  
Atrichopoda PYRUVDEHYD-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00003.16 0.5kb upstream 0.5kb upstream 10629 true AmTr_v1.0_scaffold00003: 238747-249375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00003: 238747-239246 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 0.5kb downstream 0.5kb downstream 10629 true AmTr_v1.0_scaffold00003: 239247-249875 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00003: 249376-249875 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 1.0kb upstream 1.0kb upstream 11129 true AmTr_v1.0_scaffold00003: 238247-249375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00003: 238247-239246 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 1.0kb downstream 1.0kb downstream 11129 true AmTr_v1.0_scaffold00003: 239247-250375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00003: 249376-250375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 2.0kb upstream 2.0kb upstream 12129 true AmTr_v1.0_scaffold00003: 237247-249375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00003: 237247-239246 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 2.0kb downstream 2.0kb downstream 12129 true AmTr_v1.0_scaffold00003: 239247-251375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00003: 249376-251375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 5.0kb upstream 5.0kb upstream 15129 true AmTr_v1.0_scaffold00003: 234247-249375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00003: 234247-239246 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 5.0kb downstream 5.0kb downstream 15129 true AmTr_v1.0_scaffold00003: 239247-254375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00003: 249376-254375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 10.0kb upstream 10.0kb upstream 20129 true AmTr_v1.0_scaffold00003: 229247-249375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00003: 229247-239246 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 10.0kb downstream 10.0kb downstream 20129 true AmTr_v1.0_scaffold00003: 239247-259375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00003.16 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00003: 249376-259375 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041061 5273 Angiosperm View MSA
121346469 5274 Embryophyte View MSA
123424550 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain