Gene : evm_27.TU.AmTr_v1.0_scaffold00002.56 A. trichopoda v1.0
Defline:  (1 of 2) PTHR12419:SF10 - PROTEIN OTUB-3, ISOFORM B Genomic Order:  56
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.56 Secondary Identifier:  ? PAC:31562701
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.56 0.5kb upstream 0.5kb upstream 4328 true AmTr_v1.0_scaffold00002: 1208851-1213178 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 1212679-1213178 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 0.5kb downstream 0.5kb downstream 4328 true AmTr_v1.0_scaffold00002: 1208351-1212678 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 1208351-1208850 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 1.0kb upstream 1.0kb upstream 4828 true AmTr_v1.0_scaffold00002: 1208851-1213678 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 1212679-1213678 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 1.0kb downstream 1.0kb downstream 4828 true AmTr_v1.0_scaffold00002: 1207851-1212678 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 1207851-1208850 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 2.0kb upstream 2.0kb upstream 5828 true AmTr_v1.0_scaffold00002: 1208851-1214678 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 1212679-1214678 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 2.0kb downstream 2.0kb downstream 5828 true AmTr_v1.0_scaffold00002: 1206851-1212678 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 1206851-1208850 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 5.0kb upstream 5.0kb upstream 8828 true AmTr_v1.0_scaffold00002: 1208851-1217678 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 1212679-1217678 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 5.0kb downstream 5.0kb downstream 8828 true AmTr_v1.0_scaffold00002: 1203851-1212678 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 1203851-1208850 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 10.0kb upstream 10.0kb upstream 13828 true AmTr_v1.0_scaffold00002: 1208851-1222678 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 1212679-1222678 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 10.0kb downstream 10.0kb downstream 13828 true AmTr_v1.0_scaffold00002: 1198851-1212678 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.56 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 1198851-1208850 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043014 5273 Angiosperm View MSA
121346407 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain