Gene : evm_27.TU.AmTr_v1.0_scaffold00002.523 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10371 - NADH DEHYDROGENASE UBIQUINONE FLAVOPROTEIN 2, MITOCHONDRIAL Genomic Order:  517
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00002.523 Secondary Identifier:  ? PAC:31562651
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-3781 Amborella trichopoda pathologic  
Atrichopoda PWY-4302 Amborella trichopoda pathologic  
Atrichopoda PWY-5083 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00002.523 0.5kb upstream 0.5kb upstream 8679 true AmTr_v1.0_scaffold00002: 8914273-8922951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00002: 8914273-8914772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 0.5kb downstream 0.5kb downstream 8679 true AmTr_v1.0_scaffold00002: 8914773-8923451 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00002: 8922952-8923451 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 1.0kb upstream 1.0kb upstream 9179 true AmTr_v1.0_scaffold00002: 8913773-8922951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00002: 8913773-8914772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 1.0kb downstream 1.0kb downstream 9179 true AmTr_v1.0_scaffold00002: 8914773-8923951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00002: 8922952-8923951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 2.0kb upstream 2.0kb upstream 10179 true AmTr_v1.0_scaffold00002: 8912773-8922951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00002: 8912773-8914772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 2.0kb downstream 2.0kb downstream 10179 true AmTr_v1.0_scaffold00002: 8914773-8924951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00002: 8922952-8924951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 5.0kb upstream 5.0kb upstream 13179 true AmTr_v1.0_scaffold00002: 8909773-8922951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00002: 8909773-8914772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 5.0kb downstream 5.0kb downstream 13179 true AmTr_v1.0_scaffold00002: 8914773-8927951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00002: 8922952-8927951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 10.0kb upstream 10.0kb upstream 18179 true AmTr_v1.0_scaffold00002: 8904773-8922951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00002: 8904773-8914772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 10.0kb downstream 10.0kb downstream 18179 true AmTr_v1.0_scaffold00002: 8914773-8932951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00002.523 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00002: 8922952-8932951 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047748 5273 Angiosperm View MSA
121350810 5274 Embryophyte View MSA
123425059 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain