Gene : evm_27.TU.AmTr_v1.0_scaffold00004.258 A. trichopoda v1.0
Defline:  (1 of 31) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  257
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00004.258 Secondary Identifier:  ? PAC:31550562
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00004.258 0.5kb upstream 0.5kb upstream 41687 true AmTr_v1.0_scaffold00004: 7900858-7942544 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00004: 7942045-7942544 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 0.5kb downstream 0.5kb downstream 41687 true AmTr_v1.0_scaffold00004: 7900358-7942044 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00004: 7900358-7900857 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 1.0kb upstream 1.0kb upstream 42187 true AmTr_v1.0_scaffold00004: 7900858-7943044 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00004: 7942045-7943044 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 1.0kb downstream 1.0kb downstream 42187 true AmTr_v1.0_scaffold00004: 7899858-7942044 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00004: 7899858-7900857 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 2.0kb upstream 2.0kb upstream 43187 true AmTr_v1.0_scaffold00004: 7900858-7944044 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00004: 7942045-7944044 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 2.0kb downstream 2.0kb downstream 43187 true AmTr_v1.0_scaffold00004: 7898858-7942044 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00004: 7898858-7900857 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 5.0kb upstream 5.0kb upstream 46187 true AmTr_v1.0_scaffold00004: 7900858-7947044 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00004: 7942045-7947044 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 5.0kb downstream 5.0kb downstream 46187 true AmTr_v1.0_scaffold00004: 7895858-7942044 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00004: 7895858-7900857 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 10.0kb upstream 10.0kb upstream 51187 true AmTr_v1.0_scaffold00004: 7900858-7952044 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00004: 7942045-7952044 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 10.0kb downstream 10.0kb downstream 51187 true AmTr_v1.0_scaffold00004: 7890858-7942044 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.258 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00004: 7890858-7900857 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain